Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0098 ATGAGCGTTCCTCCGCCGTCCGCGGCGGCGATGTGGACGCCGTTCACGGCGGCGCAGTGGCACGAGCTGGAGCACCAGGCCCTCATCTTCAAGTACCTCAAGGCGGGTCTCTCGGTTCCCCCTGACCTCCTTCTCCCCATTCGCAAGAGCCTCCAATTGATGTCTCACCCATCTCTGGGGTATTATGGGAAGAAGATAGACCCTGAACCGGGTCGGTGCAGGAGGACCGATGGGAAAAAGTGGAGGTGCTCGAGGGATGCGCACCCTGACTCCAAGTACTGCGACCGCCATATGATACGACGTCGTTACCGTTCAAGAAAGCCTGTGGAATCATCTCAAACTCACTCTTCTTCTCCTGCTTCTGCTTCTGCTGCTGCTGCTTCTTCAAATTCAAACAACCCTGTTGGTGGTGGTGGTTGTTCTGCTGCTACTGCTTCTGCTACTGCAGCTGCAGCTGCAACAAGCCTTCATACCCTTCCCTTGCACACCAATGGTGCAAGGGAAGGTTTCACTTTCACCCTTGGGAACAACACCAACGCCAACACACACCTTCACATGGACCCCCTCACTCTTTCAGGTGACAATACCAAGAAAACTTACAGGTTTGGACTGAACTCAGAAGCAGAGGAGCACAACGTCTTGCAGAAAGATCTCGGAAGTGTGAGGTATCAAGGTTATGACTTCACCTCAGATGCCATGTGGTCTCAAATGTCTCAGATTCCATCAAGTACTGTTTCGGAATCGAGAAGTGGTTCTACTATGTCTATGCTTGGCAACTGCTTCCAACAACAAACAATGCGAGACGCTGAGCTGTTGAATCTGGAAACTGCAAGGACCAAAGACCTCGTCTTTAGTGGCCAGTTAGGTTCAGCAGGGAGTTTGAAACAGGAATATCAGTCTCCTCAGTCTCTCTTCAGTGACTGGGACTGGAAGAAGGATTTAAGTTCCTCCGGCATTGAGTATAGGCCCAACAAGGATTTTAACTGCAACCCAGATGTCAATGTTGATTAA 1011 0.5094 MSVPPPSAAAMWTPFTAAQWHELEHQALIFKYLKAGLSVPPDLLLPIRKSLQLMSHPSLGYYGKKIDPEPGRCRRTDGKKWRCSRDAHPDSKYCDRHMIRRRYRSRKPVESSQTHSSSPASASAAAASSNSNNPVGGGGCSAATASATAAAAATSLHTLPLHTNGAREGFTFTLGNNTNANTHLHMDPLTLSGDNTKKTYRFGLNSEAEEHNVLQKDLGSVRYQGYDFTSDAMWSQMSQIPSSTVSESRSGSTMSMLGNCFQQQTMRDAELLNLETARTKDLVFSGQLGSAGSLKQEYQSPQSLFSDWDWKKDLSSSGIEYRPNKDFNCNPDVNVD 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0098 336 PANTHER - 1 336 IPR031137 GO:0005634|GO:0006351|GO:0032502
Aed6g0098 336 PANTHER GROWTH-REGULATING FACTOR 1 336 - -
Aed6g0098 336 MobiDBLite consensus disorder prediction 68 142 - -
Aed6g0098 336 Pfam QLQ 14 48 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed6g0098 336 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed6g0098 336 ProSiteProfiles WRC domain profile. 67 111 IPR014977 -
Aed6g0098 336 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aed6g0098 336 MobiDBLite consensus disorder prediction 68 97 - -
Aed6g0098 336 Pfam WRC 68 110 IPR014977 -
Aed6g0098 336 MobiDBLite consensus disorder prediction 110 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0098 Aed-Chr6 945775 951042 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0098 14 134 GRF Transcription Factor Family AT3G13960 52.632 3.47e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Aed6g0098 WRC 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0098 - - gmx:100809947 570.081