Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0094 ATGCTGCTTGCTCTTCAGGTTGGCCTGGGCTTGAATCTAAAGGATCTTGATTTACATTTCGAGACATGGAGGGAGTTTGTTTCTGGACAAATTGCTACCAGTATCGGTTTTTTGCATTCCAAGAAGTGCTTGATTGGCGATTTTTCATCCTTGGAGATTTTCTTCGGGTTTCCTTTGTTAATTGCACTTAGTGTCCTGCTCCCCTTTAATGATCAGCACAGGTTTTTGGAATCTGTCTCCTTGTTGCTCTCGATGGGTATTGTTGTTGACAATACATCAGTTACCGGAGGAAGTGCTGCTTTGTGTTCCACAGGAACAATGGAGAGGTACAAGTTAATTAAGGAAGTTGGTGATGGGACATTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAACTGGTGAAGTAGTTGCTATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGAAAAATGAACCACATAAATATTGTGAAGCTGAAGGAAGTTATTCGCGAAAGTGATATTTTATACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAAAAACTGTTTTCTGAAGGTGAAGTGAGAAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCTTACATGCACCAGCGTGGATATTTCCATCGTGACCTGAAGCCTGAAAACTTGTTGGTTACCAAGGATATCATCAAAATCGCTGATTTTGGCCTTGCCCGAGAGATCACTTCTATGAACAACAAGGGGAGGTCTGTTGTACGTGAGGTTTCAGAAACAGCTGAAAAGTTGGCGAATTTGTCGGTTACCACTCGAAGACAATCAATGGCACAACCCCATCATCATCCTCCACCAATGAAGGCTGGAGGCAATTGGATTTCTGAATCTGGAAACTTCATCCTTGGCCCCGCACAGCAGATTCCGACTGGAAGAACCTTCTCAAGAAAAGTTGCCGGATGA 996 0.4207 MLLALQVGLGLNLKDLDLHFETWREFVSGQIATSIGFLHSKKCLIGDFSSLEIFFGFPLLIALSVLLPFNDQHRFLESVSLLLSMGIVVDNTSVTGGSAALCSTGTMERYKLIKEVGDGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHINIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKLFSEGEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDIIKIADFGLAREITSMNNKGRSVVREVSETAEKLANLSVTTRRQSMAQPHHHPPPMKAGGNWISESGNFILGPAQQIPTGRTFSRKVAG 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0094 331 Gene3D Transferase(Phosphotransferase) domain 1 186 296 - -
Aed6g0094 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Aed6g0094 331 Pfam Protein kinase domain 110 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0094 331 SMART serkin_6 110 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0094 331 ProSiteProfiles Protein kinase domain profile. 110 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed6g0094 331 Gene3D Phosphorylase Kinase; domain 1 101 185 - -
Aed6g0094 331 ProSitePatterns Protein kinases ATP-binding region signature. 116 140 IPR017441 GO:0005524
Aed6g0094 331 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 107 258 - -
Aed6g0094 331 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 107 258 - -
Aed6g0094 331 SUPERFAMILY Protein kinase-like (PK-like) 106 258 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0094 Aed-Chr6 920901 927222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0094 107 261 Core Cell Cycle Gene Families AT1G66750 38.365 1.13e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Aed6g0094 Pkinase 6.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0094 K08829 - gmx:100810150 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0094 6 920901 927222 Aed6g0094 6 920901 927222 ECH