Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0085 ATGGTTCGGGATGGGAGCGTCGTCCCGGCGGACCCGCAGGCAATGGCGGTTGTGGAGAAGAAGACACAGTCTTCTCGGAGTTGGATTCTGTTTGATACCACAGGGCAAGGCTCCTTGCTCGACGTGGACAAATATGCTATCATGCATAGGGTTCAGATTCATGCTCGTGATCTCAGAATCCTTGATCCATTGCTCTCTTACCCCCCTACCATTCTCGGTCGTGAGAAGGTCATTGTTCTTAACTTGGAGCATATCAAGGCGATTATCACCGCTGAAGAGGTGTTGCTGAGAGATCCAACAGATGAAAATGTGATCCCTGTTGTTGAGGAACTGCAAAGGCGGTTGCCTCGATTAAGTGCCGGTCTTCAACTGCAAGGAGATGGTAAGGAGTATCCTGGTGGCCACAATGATGCTGAAGCAGCGGAAGAAGATGAGTCACCCTTTGAATTCCGGGCCCTAGAGGTTGCTTTAGAATCCATTTGTAGTTATCTTGCTGCACGTACAACAGAATTGGAGATGGCTGCCTATCCTGCATTAGATGAACTTACCTCCAAGATTAGTAGTCGTAAGTTGGACAGAGTTCGTAAACTGAAGAGTGCAATGACAAGGCTGACTGCTAGGGTTCAAAAGGTCAGGGATGAGCTTGAACAATTGCTGGATGATGATGATGATATGGCTGATCTTTACCTATCAAGAAAGGCTGGTTCAGCATCACCAGTTAGTGGATCAGGTGCTGCAAATTGGCTTGCTGCCTCCCCCACCATAGGATCAAAGATGTCTAGAGCAAGTTTAGCAACAGTTCGTTTAGATGAAAATGACGTGGAAGAGCTTGAAATGTTACTCGAGGCTTATTTCAGTGCAATCGAGTACACATTGAACAAATTAACCATATTGCGAGAGTACATTGATGATACTGAAGATTATATTAATATTCAACTGGACAACCATCGTAATCAGCTGATTGATATAGAGCTCTTTCTTAGCTCTGGAACTGTTAGTCTAACTTCCTACTCTTTGGTGGCTGCTATATTTGGCATGAATATCCCATATTCTTGGAACGAGAACCATGGTTACGTATTCAAATGGGTAGTTATTCTCACGGGAGCATTTTCTGCTTTGATGTTTGTCTTGTTAAGAGTCTATGTCCGCCACAAAAAGGGGTTAAAAGGGGCATGTAGAGAATGA 1185 0.4481 MVRDGSVVPADPQAMAVVEKKTQSSRSWILFDTTGQGSLLDVDKYAIMHRVQIHARDLRILDPLLSYPPTILGREKVIVLNLEHIKAIITAEEVLLRDPTDENVIPVVEELQRRLPRLSAGLQLQGDGKEYPGGHNDAEAAEEDESPFEFRALEVALESICSYLAARTTELEMAAYPALDELTSKISSRKLDRVRKLKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKAGSASPVSGSGAANWLAASPTIGSKMSRASLATVRLDENDVEELEMLLEAYFSAIEYTLNKLTILREYIDDTEDYINIQLDNHRNQLIDIELFLSSGTVSLTSYSLVAAIFGMNIPYSWNENHGYVFKWVVILTGAFSALMFVLLRVYVRHKKGLKGACRE 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0085 394 CDD Mrs2_Mfm1p-like 28 386 IPR039204 -
Aed6g0085 394 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 390 IPR039204 -
Aed6g0085 394 Pfam CorA-like Mg2+ transporter protein 269 379 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Aed6g0085 394 MobiDBLite consensus disorder prediction 124 144 - -
Aed6g0085 394 Gene3D Magnesium transport protein CorA, transmembrane region 106 320 - -
Aed6g0085 394 Gene3D - 13 99 - -
Aed6g0085 394 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 390 - -
Aed6g0085 394 Coils Coil 194 221 - -
Aed6g0085 394 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 325 379 IPR045863 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0085 Aed-Chr6 863976 865160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0085 1 363 MRS2 Gene Family AT5G64560 76.359 6.87e-179 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0085 K16075 - gmx:100786817 647.121