Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0068 ATGTCCCTCCTCAGCCGATTCTTCTACAAGCGCCCCCCAGATGGCTTACTCGAATTCTCCGACAGAGTCTACGTCTTCGATTCATGCTTCTCCACGGAGGCCCTCCCGGACGGAATGTACAGCCTCTACCTCCGCCAAATCCTCTCCGACCTCCACGAGGACTTCCCGGAATCCTCCTTCGTGGCCCTCAACTTCCGCGACGGCGACCATCGCAGCAGCTTCTCCCGCGTCCTCTGCGACCTCGACGCCACCGTGGTCGACTACCCTAAGCAGTACGAGGGCTGCCCCCTCCTCCCCCTCTCCCTCGTCCACCACTTCCTCCGCCTCTGCGACTCCTGCCTCGCCGACCCCGCCGCCCTGATCCTCCTCCACTGCGAGCGCGGCGGCTGGCCCCTCCTCGCCTTCCTCCTCGCCGCCTTCCTCGTCTTCCGCAAGGCGCAGAGCGGTGAGCGGAGGATTCTTGAGACGGTCCATAAAGAGGCCCCCAAAGGGCTGCTGCAGCTCCTCTCGCCGCTGAACCCTTTGCCGTCTCAGCTTCGGTATGTTCAGTATGTTGCCAGGCGGAACATTGGCGCCGAGTGGCCCCCGCCAGAGCGAGCGCTGTCTTTGGACTGTGTTATTCTCAGAGGAGTTCCTGGCTTTGATGCTGGGAATGGCTGCAGGCCCTTCTTTAGGATTTTTGGCAGGAATTTGCTTAACTGTGATGTGATTAAGATTGATATTCAATGCTTAGTGCAAGGGGATGTGGTGTTGGAGTGTGTCCATTTGGATTTGGATCCAGAGAGGGAAGTCATGATGTTTCGGGTGATGTTTAACACGGCGTTTATTCGGTCCAACATTTTGATGCTGAATGCCGAGAACTTGGACATGCTTTGGGATTCGAAGGAGCGGTATCTGAAGGGCTTCCGAGCTGAGGTTTTGTTTGGGGAGGTTGAAAGCATAAGTCCTCCAAGGGCTCCAACAAGTATTTTAGATGATGAGGTGAGAGGTGGATTGCCCATTGAGGCATTTTCAAGGGTTCAAGAACTTTTTAGTGGTGTAGAATGGGTTGAAAGTGGCGATGCAGCTGCTGTCTGGCTGCTCAAACAACTTACTAACTTAAATGATGCCAAAGAGTTTTCAAGGTTTCAAGGTAGAGGAAGTTGGTATTCATCACCTGGTGACTCTGAAGAAGAAAATAATGAATCGAGCACTGCTGATAGTTCAGATGAGGCCTTTGATGTTATTCCCAAGTCTTATGCCGATCCCTCAAAATTATTGATATTGGACACCCCTGATTTGGTCCATTTAGCTTTTGAGAACAATGGTGGAGATTATGTAAATCTCACTTCTAGAACACCTGTTCAGGCATTGACTGATGATGTTTCATCACCTCATCATGCTACAAGTAAGGAATATTCTCCTTGTTCCTCTCCACCATCATCTTCACCAATTCCCGCTACTCAGTCTCTTCCAACACCACCACCACCTCCTCCATCAAGACCTGTACAGCCAGGTTTAGCTCCTCCCCCTCCTCCTCCTCCCCCACCTCTGCATCTTATAGTTCAGAACGTGAATAATGCTTCTACATTGGCTTCACCTCCTCCTCCTCCACCTCCCCCAGGACCTTTACGAACAAGTTCAGCCCCTCCACCACCACCACCACCACCTCCTCCTCCTCCAGGTCATGTACAAACAGGTTCAGCCCCACCTCCTCCTGGATCTGTACAAACTGGTTCTGCTCCACCACCTCCACCTCCACCTCCTCCAGGATTTGTACAAACAGGTTCAGCTCCACCACCTCCAGGTCCTGTACGGATAGGTTCAGCTCCACTGCCACCTCCACCACCTCCAGGTCCTGTGCGAACAGGTTCAGCTCCACCGCCACCACCTCCACTTCCTCCAGGTTCTGCGCGAACAGGTACTGTCCCGCCACCGCCTCCACCTCCTCCAGGTCCTGTACGAACAGGTTCAGCCCCACCACCACCTCCCCCAGGTCCTGTACGAACAGGTTCATCCCCACCACCACCACCTCCACCTCCCCCAGGTCCTGTACGAACAGGTTCAGCCCCACCACCACCACCTCCACCTCCTCCAGGTCTTGTGCGAACAGGTTCAGCCCCGCCACCACCTCCACCTCCTCCAGGTCCTGTACGAACAGGTTCAGCTCCACCACCACCACCACCGGCACCAAAACCTCCAGGTGCTCCTCCTCCTCCACCTGGTCGTGGTGCATCACCAATGCCACCTCCACCTCCTGCAGCTAGGGCCCCTGGCGTGGTACCACCCCCAGGCAAAGCTTCAACAACAAATGTTGGAAGAGGTCGTGGTACTGTTAATGCTCCTAAGAAAACTTTGCTAAAACCCCTACATTGGGTGAAAGTTGCTCGAGCAGCCAAGGGAAGTCTTTGGGCTGATTCACAGAAACAGGGTAGTGGAACAAGGGCCCCTGAGATAGATATATCAGAACTTGAGAGTCTGTTTTCAGCAGCATCTACTTCTGATGGGAGCAGTACTAAAGGTGGAGCTCGGCGTGGTCCTAATATTAACAAACCTGAGAAAGTACAATTGGTTGACTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAAAGCAGTCCTGGCGTTGGATTCTTCTGTTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCCACAAAGGAAGAGATGGAGATGTTAAAGAATTATGCAGGAAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCACGCGTGGAATCCAAATTAAGGGTTTTTGCTTTTAAAATCACCTTTTCTTCTCAAGTGGACGATTTGAAGCTAAATTTGAACACAATCAACAATGCAGCCAAAGAGGTGAAAGAATCTGGAAAATTGCGTCAAATAATGCAGACTATTCTTACACTGGGCAATGCCTTGAATCAAGGAACAGCACGGGGATCAGCTGTTGGATTCAAATTGGATAGCCTTCTTAAGTTATCTGATACTCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTCGCTGAGAAAATGCCAGAATTGCTAGATTTTGATAAGGATCTTGTTCATTTAGAAGCAGCTTCTAAGATTCAACTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTTGCTACTTCTGAAAATGATGGTGCTATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGATGTGAGGTCCCTTATAACATTGTATTCTGAAGTGGGAAGAAGTGCCGACTCTTTGTCCCAATACTTTGGAGAGGATCCAGCTAGATGCCCCTTTGAACAAGTGACACAAATCCTTTTTGTGTTCGTCAAGATGTTCAACAAATCAAGGGAAGAGAATGAAAGACAGGCAGATGCTGAAAAAAAGAAATTAGAGAAAGAAGCCTTGAAGGAAAGGACGGCAAATAACATGCATTCCAAAAAAGACAGCCTTTGA 3549 0.4951 MSLLSRFFYKRPPDGLLEFSDRVYVFDSCFSTEALPDGMYSLYLRQILSDLHEDFPESSFVALNFRDGDHRSSFSRVLCDLDATVVDYPKQYEGCPLLPLSLVHHFLRLCDSCLADPAALILLHCERGGWPLLAFLLAAFLVFRKAQSGERRILETVHKEAPKGLLQLLSPLNPLPSQLRYVQYVARRNIGAEWPPPERALSLDCVILRGVPGFDAGNGCRPFFRIFGRNLLNCDVIKIDIQCLVQGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNAENLDMLWDSKERYLKGFRAEVLFGEVESISPPRAPTSILDDEVRGGLPIEAFSRVQELFSGVEWVESGDAAAVWLLKQLTNLNDAKEFSRFQGRGSWYSSPGDSEEENNESSTADSSDEAFDVIPKSYADPSKLLILDTPDLVHLAFENNGGDYVNLTSRTPVQALTDDVSSPHHATSKEYSPCSSPPSSSPIPATQSLPTPPPPPPSRPVQPGLAPPPPPPPPPLHLIVQNVNNASTLASPPPPPPPPGPLRTSSAPPPPPPPPPPPPGHVQTGSAPPPPGSVQTGSAPPPPPPPPPGFVQTGSAPPPPGPVRIGSAPLPPPPPPGPVRTGSAPPPPPPLPPGSARTGTVPPPPPPPPGPVRTGSAPPPPPPGPVRTGSSPPPPPPPPPGPVRTGSAPPPPPPPPPGLVRTGSAPPPPPPPPGPVRTGSAPPPPPPAPKPPGAPPPPPGRGASPMPPPPPAARAPGVVPPPGKASTTNVGRGRGTVNAPKKTLLKPLHWVKVARAAKGSLWADSQKQGSGTRAPEIDISELESLFSAASTSDGSSTKGGARRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLKAVLALDSSVLDIDQVENLIKFCPTKEEMEMLKNYAGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVDDLKLNLNTINNAAKEVKESGKLRQIMQTILTLGNALNQGTARGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASKIQLKALAEEMQAVSKGLEKVEQELATSENDGAISTGFRKVLKNFLDIAEADVRSLITLYSEVGRSADSLSQYFGEDPARCPFEQVTQILFVFVKMFNKSREENERQADAEKKKLEKEALKERTANNMHSKKDSL 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0068 1182 MobiDBLite consensus disorder prediction 453 471 - -
Aed6g0068 1182 Gene3D Protein tyrosine phosphatase superfamily 15 189 IPR029021 -
Aed6g0068 1182 PANTHER FORMIN-J 1 686 - -
Aed6g0068 1182 PANTHER FORMIN-J 684 1177 - -
Aed6g0068 1182 ProSiteProfiles C2 tensin-type domain profile. 198 311 IPR014020 -
Aed6g0068 1182 SMART PTEN_C2_2 196 310 IPR014020 -
Aed6g0068 1182 SMART it6_source 498 1179 IPR015425 -
Aed6g0068 1182 SUPERFAMILY Formin homology 2 domain (FH2 domain) 845 1173 - -
Aed6g0068 1182 Coils Coil 1145 1168 - -
Aed6g0068 1182 Coils Coil 949 969 - -
Aed6g0068 1182 Pfam Formin Homology 2 Domain 775 1145 IPR015425 -
Aed6g0068 1182 Pfam C2 domain of PTEN tumour-suppressor protein 197 309 IPR014020 -
Aed6g0068 1182 MobiDBLite consensus disorder prediction 453 778 - -
Aed6g0068 1182 ProSiteProfiles Formin homology-2 (FH2) domain profile. 770 1170 IPR015425 -
Aed6g0068 1182 MobiDBLite consensus disorder prediction 823 843 - -
Aed6g0068 1182 MobiDBLite consensus disorder prediction 524 561 - -
Aed6g0068 1182 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 198 311 IPR035892 -
Aed6g0068 1182 Gene3D Formin, FH2 domain 771 1156 IPR042201 -
Aed6g0068 1182 MobiDBLite consensus disorder prediction 1149 1182 - -
Aed6g0068 1182 Gene3D - 195 314 - -
Aed6g0068 1182 MobiDBLite consensus disorder prediction 823 837 - -
Aed6g0068 1182 MobiDBLite consensus disorder prediction 568 753 - -
Aed6g0068 1182 Coils Coil 1051 1078 - -
Aed6g0068 1182 MobiDBLite consensus disorder prediction 472 513 - -
Aed6g0068 1182 PRINTS Proline rich extensin signature 539 564 - -
Aed6g0068 1182 PRINTS Proline rich extensin signature 519 536 - -
Aed6g0068 1182 PRINTS Proline rich extensin signature 491 507 - -
Aed6g0068 1182 PRINTS Proline rich extensin signature 468 489 - -
Aed6g0068 1182 MobiDBLite consensus disorder prediction 381 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0068 Aed-Chr6 774163 784505 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0068 1 443 FH2 protein (formin) Gene Family AT1G31810 64.331 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0068 - - gmx:100809152 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed6g0068 6 774163 784505 Aed6g0068 6 774163 784505 ECH