Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0057 ATGGTATCTTCTATATGCACTGAATATTTGTTTTTGAATGCACAGGCTGGTCATCAACTCAATTTTGTAGTGGGAACCCATGTTTGGGTTGAGGATCCTGAGTTAGCTTGGATAGATGGGGAAATCCAGGAAAATAAAACTGATCAGATCACGGTTCTCTGTGAATCAGGCCCGAAGGATGTGAACAAATCAGTTAACATGTATCCCAAAGATCCAGAATTCCCACCTAATGGTGTGGAAGATATGACAAGATTGGCATATTTGCATGAACCAGGAGTACTTCAAAATTTGCAAGTTCGGTATGCCATGAATGAAATTTATACATACACAGGAAATATATTGATAGCTGTGAACCCTTTTCAAAGGTTACCTCATTTGACTGAAACTAGTACCATGGCAAAGTATAAAGCTGCGGCTTTTGGTGAGCAGAGCCCACATCCTTTTGCAATTGCAAGTTCTGCATATAGGACTGTGGCTAGTATCAAAGGACAGTCCAATCCAGTTTTAGAAGCATTTGGCAATGCAAAGACTCTTAGGAATAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAGTTTGATCAAAAGGCGAGAATTTCAGGAGCTGCAATCAGAACATATTTGCTGGAACGATCACGTGTCTGTCAAGTTTCTGATCCTGAGAGAAATTATCATTGCTTTTATATGCTTTGTGCTGCACCACAAGAGGATGTTAATAAGTACAAATTGGGAGATCCAAGAAAATTTCGTTACCTTAATCAATCAAATTGCATTAAGCTGGATGGGGTGGATGATTCTAAGGAGTACCTTGATACTAAGAGAGCTATGGAGGTTGTTGGGATCAACTCTGATGAACAGGATGCTATATTTCGAATAGTAGCAGCAGTACTTCATTTAGGAAACATTGAATTTGTGAAGGGAGGGGGTGAGGATCCAGATTCCTCTCAGCCCAAGGATGACCAATCCTATTCCCACCTTAAAATCGCAGCCGAGCTTCTGATGTGTGATGATCAGTCCCTTGAAGACTCTTTCTGCAAACGTGTTATGGTGACTCGTGGTGACACCATAACAAAATCACTCGATCCAAATTCTGCAGCTCTGAGTAGAGATGCATTGGCTAAAATAGTTTATTCAAGGCTTTTTGACTGGATTGTGAACAAGATTAACAACACTATCGGGCAAGATCCAGATTCCAAAAGCTTGATTGGGGTTTTAGACATATATGGATTTGAGAGTTTCAAGACAAATAGCTTTGAACAATTTTGTATCAATTTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAAATGGAGCAAGAGGAATATACAAAGGAAGAGATTGATTGGAGTTATATTGAGTTTGTTGATAATCAAGATGTTCTTGATCTCATAGAGAAGGTAAACCCGGAGGCATTATTGCTCTTCTGGATGAGGCCTGGTATTTATTTATTGACTGAATGGTTCAAATACTATGGAATTATGTTTCCAAGATCAACGCATGAAACATTTGCTGAAAAGCTCTATCAAACCTTAAAAGACAATAAACGCTTCAGCAAACCAAAGTTGTCTCGCACTGACTTCACCATTAACCATTATGCCGGTGATGTCACTTATCAAACTGATTTTTTCCTTGATAAAAATAAAGACTACATTGTTCCAGAACATGCTGCTCTACTCAGCGCTTCAAAGTGCCCCTTTGTTTCAGGGCTGTTCCCACCTTTACCTGAGGACACTACAAAATCAACTAAGTTCTCTTCTATAGCCTCTCAGTTTAAGCTACAACTGCAAACTTTGCTTGAAACACTAAATGCTACCGAGCCACACTACATTCGTTGTGTAAAGCCAAATAATCTTCTGAAGCCAGGGATATTCGAGAACAATAATGTGTTGAATCAGCTTCGCTGTGGTGGAGTAATGGAGGCAATTCGGATAAGTTGTGCCGGATATCCCACAAGAAAGAGCTTTGATGAATTTGTTCAGCGGTTTACTATCCTGGAACCTAAGGTTCTGAAAGCATGCCCTGATGAGATGACTGCTTGCAAGAGGCTTCTAGATAGAGCGAACCTTAAAGATTATCAGATTGGAAAGACAAAAGTGTTTCTGAGAGCAGGTCAAATGGCAGAACTAGATGGATGTCGTGCTGAGGTCTTGGGAAGATCTGCATGCATTATTCAGAAAAAAGTCCGCATGTTTATTAGTCGAAAACACTATATTTTATTGCAGTTTTCTGCCACTGAACTTCAAAGAGTTGCTAGAGGACAACTTGCACGACATCAGTATGAATGCATGAGGAGGGAAGCTGCTTGTATGAAAATTCAGAAAGACGCCCGCATGTATATTTCCAGAAAGGTTTACAAAGCTATTTATGCCTCAGTTGTTAATATTCAAACTGGTATGAGAGGGATGTCTGCTAGAAATGACCTTAGATTCAGGAAACGAACACAAGCTTCAACTGTTATTCAGGGTCACTACAGAGGTCATTCAGCTTATACTTATTTCAAGAAGCTAAAGAGAGCAACAATTGCTACACAGTGTTCCTGGAGGAGAACATTGGCACGTAGAGAACTTCGAAAGCTTAAAATGGTGTTCCCTCTTCCCGCCTTATTTACCTTTCTTAATTCTTCAAGCATTAGCAAACTCTGTAACCTCAACATAGATATTGTTGGGCACATCCACATGTATGCCATTGACAATAATACAACTTTCAGATTCCTCACTCTATCTCTTTTACTTTCCTCTGAAGCCAAGACACAGGAAAATGAAAAACTGCAACATGCTTTGCAAGAGAAGGAGCTTCAGTTCCAAGAAATGGAGGAAGCCAAAAAACAGGAAAATGAAAAGCTACAACATGCTTTGCAAGAGAAGGAGCTTCAGTTCCAAGAAATGGAGGAAGCCAAAAAACAGGAAAATGAAAAGCTACAACATGATTTACAAGAGATGAAACTTCAGTTCCAAGAAACTAAGGAAGCCAAGACACAGGAAAATGAAAAGCTACAACATGATTTACAAGAGATGGAGCTTCAGTTCCAAGAAACTAAGGAAGCCCTTATTCAGGAACGGGAGGCTGCCAAGAAAGAAGCTGAGAAAACTCCAAATACACAGGAGAATTCTGTCAATGTTGTTGATAGCGAATTGATCAACAAGCTTACTGCTGAAAATGAACAACTTAAGGAACTGGTTAATTCGTTGGAAAAGAAACCTGCAGAAGAGTCTTCTGTTAATGTTACTGACAATGAGTTGATCAATAAACTTAATTCAGAAAACGAACATCTTAAGGAACTGGTTAATTCGTTGGAAAAGAAACTCGCACAAGAGATTCCTGTGAATGTTGACAATGAGTTGATCAGTAAAATTTCTTCAGAAAATGAACATCTTAAGGAACCGATTAATTCATCGGATAAGAAAACCGTACATGAAGTTTCTATTAATGCTACCGACAATGAGGTGATAAATAATCTTAAGGATCAGATTAATTCATTGGAAAGAAAAGTTGAAGAAGCAGAGAGGAAATATGAAGAAAGTAGCAGGATTAGTGAGGAGCGCATGAGTCAAATTATAGAAACAGAATCAAAGATGATTGAGACAAAGACAAATATGCAGAGGCTTGAAGAAAAACTATCTGATTTGGAAACTGAGAATCAAGTTATGCGGCAGCAAGCCTTGTTGAGTTCATCATCCAGGAGAATGTCAGGAAAGCTTACACCTGCAGCTGCTACAACTCCGCCTTTGGAAAATGGTCATCAGGCACAGCCCGTTACTGCTCCTGTAAAAACATTTGGTGCAGAGGATAGTAAAAATCCGGACAACAATGATTGGATGGCTTATTGGCTATCCAACACATCTTCTTTGTTTTTCCATCTTCAGCGATGTCTAAGAGTACCTACAGCACGAAAACCACCCACTCCATCATCATTTTTTGGGAGGATGACCCAGGGTTTCCGCTCATCTAATAGTCTTTCCAGCAATGCTTTTGATCTAGAGCATCAGGTTGATGCCAAGTATCCAGCTTTACTTTTCAAGCAACAGCTTGCAGCTTATGTTGAAAAGATATATGGAATCGTCCGAGAAAACATTAAGAAAGAATTGTTACCTCTACTTTCTTCTTGCACTAAGGCAGACAAAACATCAAATGATAACAACCAACTATCTGGTTCTTGGACCAGCATTATCGAATGCCTTAATAAATATCTCAAGATTCTGAAAGAAAACTATGTGCTTCCTGTTCTAGTGCAGAAGTTGTTTAATCAAATTTTTCAATACATCAATGTGGAACTCTTTAATAGCCTTATTTTACATCAAGAAGGCTGCACATTCAAAAGGGGAGAATATATAAAATCAGGGTTGGATGAGTTTGAACTATGGTGTACTGAAGCAACGGAAGAGTATGTTGGCACATCTTTGGATGAACTCAAACATGCAAAACAAGCAGTTAGATTTTTGGTTTCACCGCAGAAGGAAGAGCTATCCTATGATGATCTTACAAATGACATTTGCCCTGTCTTGAGTGCTCAACAACTTCATAGACTATGTACACTTTTTGGTGATGACGACGACAAAAGACAAAGTGTATCACCAGATGTCACTACTAGATTGAAGCTTCTAATGACAGATGATGCAGATGAAGATGACAAGTCTTTCTTGTTGGAGGACAACACAAGTCATCCTATTATCGTTGAAGAGATCTCTACTTCCTCTCTAGATAAGACTGTTCCAAAAATAAAACCTCCTGCAGAACTTATGGAGAATGCAAACTTCCAATTTTTACATGATTATTCTTAG 4794 0.389 MVSSICTEYLFLNAQAGHQLNFVVGTHVWVEDPELAWIDGEIQENKTDQITVLCESGPKDVNKSVNMYPKDPEFPPNGVEDMTRLAYLHEPGVLQNLQVRYAMNEIYTYTGNILIAVNPFQRLPHLTETSTMAKYKAAAFGEQSPHPFAIASSAYRTVASIKGQSNPVLEAFGNAKTLRNNNSSRFGKFVEIQFDQKARISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPQEDVNKYKLGDPRKFRYLNQSNCIKLDGVDDSKEYLDTKRAMEVVGINSDEQDAIFRIVAAVLHLGNIEFVKGGGEDPDSSQPKDDQSYSHLKIAAELLMCDDQSLEDSFCKRVMVTRGDTITKSLDPNSAALSRDALAKIVYSRLFDWIVNKINNTIGQDPDSKSLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKVNPEALLLFWMRPGIYLLTEWFKYYGIMFPRSTHETFAEKLYQTLKDNKRFSKPKLSRTDFTINHYAGDVTYQTDFFLDKNKDYIVPEHAALLSASKCPFVSGLFPPLPEDTTKSTKFSSIASQFKLQLQTLLETLNATEPHYIRCVKPNNLLKPGIFENNNVLNQLRCGGVMEAIRISCAGYPTRKSFDEFVQRFTILEPKVLKACPDEMTACKRLLDRANLKDYQIGKTKVFLRAGQMAELDGCRAEVLGRSACIIQKKVRMFISRKHYILLQFSATELQRVARGQLARHQYECMRREAACMKIQKDARMYISRKVYKAIYASVVNIQTGMRGMSARNDLRFRKRTQASTVIQGHYRGHSAYTYFKKLKRATIATQCSWRRTLARRELRKLKMVFPLPALFTFLNSSSISKLCNLNIDIVGHIHMYAIDNNTTFRFLTLSLLLSSEAKTQENEKLQHALQEKELQFQEMEEAKKQENEKLQHALQEKELQFQEMEEAKKQENEKLQHDLQEMKLQFQETKEAKTQENEKLQHDLQEMELQFQETKEALIQEREAAKKEAEKTPNTQENSVNVVDSELINKLTAENEQLKELVNSLEKKPAEESSVNVTDNELINKLNSENEHLKELVNSLEKKLAQEIPVNVDNELISKISSENEHLKEPINSSDKKTVHEVSINATDNEVINNLKDQINSLERKVEEAERKYEESSRISEERMSQIIETESKMIETKTNMQRLEEKLSDLETENQVMRQQALLSSSSRRMSGKLTPAAATTPPLENGHQAQPVTAPVKTFGAEDSKNPDNNDWMAYWLSNTSSLFFHLQRCLRVPTARKPPTPSSFFGRMTQGFRSSNSLSSNAFDLEHQVDAKYPALLFKQQLAAYVEKIYGIVRENIKKELLPLLSSCTKADKTSNDNNQLSGSWTSIIECLNKYLKILKENYVLPVLVQKLFNQIFQYINVELFNSLILHQEGCTFKRGEYIKSGLDEFELWCTEATEEYVGTSLDELKHAKQAVRFLVSPQKEELSYDDLTNDICPVLSAQQLHRLCTLFGDDDDKRQSVSPDVTTRLKLLMTDDADEDDKSFLLEDNTSHPIIVEEISTSSLDKTVPKIKPPAELMENANFQFLHDYS 1597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0057 1597 CDD MYSc_Myo11 91 707 IPR036018 -
Aed6g0057 1597 ProSiteProfiles Dilute domain profile. 1188 1542 IPR002710 -
Aed6g0057 1597 Coils Coil 1051 1071 - -
Aed6g0057 1597 Pfam IQ calmodulin-binding motif 843 862 IPR000048 GO:0005515
Aed6g0057 1597 Pfam IQ calmodulin-binding motif 724 742 IPR000048 GO:0005515
Aed6g0057 1597 Pfam IQ calmodulin-binding motif 748 765 IPR000048 GO:0005515
Aed6g0057 1597 Pfam IQ calmodulin-binding motif 772 791 IPR000048 GO:0005515
Aed6g0057 1597 Gene3D - 654 717 - -
Aed6g0057 1597 Coils Coil 1148 1182 - -
Aed6g0057 1597 ProSiteProfiles IQ motif profile. 818 847 IPR000048 GO:0005515
Aed6g0057 1597 SMART MYSc_2a 71 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0057 1597 Coils Coil 918 1031 - -
Aed6g0057 1597 Pfam Myosin N-terminal SH3-like domain 25 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aed6g0057 1597 Pfam DIL domain 1418 1519 IPR002710 -
Aed6g0057 1597 PANTHER MYOSIN HEAVY CHAIN 20 158 - -
Aed6g0057 1597 Coils Coil 1086 1109 - -
Aed6g0057 1597 SUPERFAMILY Myosin S1 fragment, N-terminal domain 21 75 - -
Aed6g0057 1597 Gene3D - 772 819 - -
Aed6g0057 1597 Gene3D - 722 771 - -
Aed6g0057 1597 Gene3D - 820 867 - -
Aed6g0057 1597 ProSiteProfiles Myosin motor domain profile. 77 719 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0057 1597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 772 IPR027417 -
Aed6g0057 1597 ProSiteProfiles IQ motif profile. 770 799 IPR000048 GO:0005515
Aed6g0057 1597 Coils Coil 1190 1224 - -
Aed6g0057 1597 SMART iq_5 744 766 IPR000048 GO:0005515
Aed6g0057 1597 SMART iq_5 817 839 IPR000048 GO:0005515
Aed6g0057 1597 SMART iq_5 721 743 IPR000048 GO:0005515
Aed6g0057 1597 SMART iq_5 792 814 IPR000048 GO:0005515
Aed6g0057 1597 SMART iq_5 769 791 IPR000048 GO:0005515
Aed6g0057 1597 SMART iq_5 840 862 IPR000048 GO:0005515
Aed6g0057 1597 MobiDBLite consensus disorder prediction 1227 1254 - -
Aed6g0057 1597 Gene3D - 419 575 - -
Aed6g0057 1597 ProSiteProfiles IQ motif profile. 795 822 IPR000048 GO:0005515
Aed6g0057 1597 PANTHER MYOSIN 164 1269 - -
Aed6g0057 1597 PANTHER MYOSIN 1270 1594 - -
Aed6g0057 1597 PANTHER MYOSIN 20 158 - -
Aed6g0057 1597 Gene3D Myosin VI head, motor domain, U50 subdomain 283 418 - -
Aed6g0057 1597 Gene3D Kinesin motor domain 581 653 IPR036961 -
Aed6g0057 1597 Gene3D Kinesin motor domain 27 160 IPR036961 -
Aed6g0057 1597 ProSiteProfiles IQ motif profile. 745 773 IPR000048 GO:0005515
Aed6g0057 1597 Pfam Myosin head (motor domain) 79 160 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0057 1597 Pfam Myosin head (motor domain) 164 707 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0057 1597 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 775 867 IPR027417 -
Aed6g0057 1597 Gene3D Kinesin motor domain 161 265 IPR036961 -
Aed6g0057 1597 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 23 72 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aed6g0057 1597 SMART DIL_2 1417 1524 IPR002710 -
Aed6g0057 1597 PANTHER MYOSIN HEAVY CHAIN 164 1269 - -
Aed6g0057 1597 PANTHER MYOSIN HEAVY CHAIN 1270 1594 - -
Aed6g0057 1597 PRINTS Myosin heavy chain signature 107 126 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0057 1597 PRINTS Myosin heavy chain signature 402 430 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0057 1597 PRINTS Myosin heavy chain signature 455 483 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0057 Aed-Chr6 650042 665041 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0057 23 1595 Myosins gene family AT1G04600 50.507 0.0 1589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0057 K10357 - gmx:100791031 2285.38