Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0053 ATGCATCACCACAACAACAATAATAATCATTCCTTCATTGTGACCAAATTAGCCACCAACAACACCAGCACCAACATGATGAGCTTCTTCTCCCTCTTGCAACACATCCACATCCTGGAGCTCGCCATTGCAACCACAATGTTCATAGCCCTTCGAGCTTGGTGCTCGAAGCGGCACCACGGGCTACCCGTTTGGCCGGTCCTCGGAATGCTCCCTTCTCTCATCTATGGCCTCAAAACCAACCTCTTTGAATGGTTATCTCAAGTCCTCATCCGCCAAAACGGAACCTTCACATTCCGTGGCCCGAGGTTCGCCGGCCTTGACTGCGTCATCACCTCCGACTCTCGCAACATCAAACACCTCCTCAAAACTAAGTTCTCCTCCTTCCCCAAGGGAAAGTTTTTCAGGTCCACGCTTCGTGACCTGCTGGGAGATGGCATATTCAACGCGGACAACGAGACATGGCAGAGGCAAAGAAAAACGGCGAGCCTCGAGTTCCACTCGGCAACGTTCCGAAAGCTAACCGCAGAGTCACTCTTCGAACTCGTCCACAAGAGGCTCTTACCATTGTTGGAGTCATGCGTCAACAAATCACGCGCCATAGACCTTCAGGACGTTCTGCTAAGGCTCACCTTCGACAACGTGTGCATGATGGCCTTCGGCGTCGATCCAGGTTGTTCGCAGCCGCACATGCCGGAGATTCCGTTCGCGATGGCGTTCGAGGACGCGACGGAGATCTCGATGAGGAGATTCATCACGCCGGTGTGGATGTGGAAGCTCATGAGGTTTCTGAACGTCGGCGCGGAGAGGAGGCTGAAGGAGTCGATAAAGAAGGTGGACGAGTTCGCGGAGAGTGTGATCAGGACAAGGAAGAAAGAACTCGCTCTGCAGCACGAGAAGTCTTCAGATATATTAACCGTGTTCATGAGACTCAAAGATGAGAATGGAATGGCTTATTCAGATAGGTTTTTGAGGGACATTTGTGTGAATTTCATTCTGGCCGGGAGGGACACTTCTTCTGTTGCTTTGAGCTGGTTTTTTTGGTTGCTGCATGAGAATCCTAAAGTGGAGGAGAAGATTGTGGCTGAGATTTGCAGTGTGGTGAAGCAGAGGGAAGGGTTCAAGAAGGAAGAGGTTGTTGGGAATGGGAGCTGTTTGGCATTTTGGCCAGAGGAGATTAAGAAAATGGATTATTTGCATGCTGCCCTTTCAGAAGCTCTTAGGTTGTATCCTTCTGTTCCTGTGGATCACAAGGAGACGGTGGAGGATGTGACATTCCCAGATGGAACAGTGGTAGAGAAAGGCACAAAAGTGATATACTCAATATACACAATGGGGAGAATGGAGAGCATATGGGGAAAAGACTGCAGGGAGTTCAAGCCAGAAAGGTGGCTAAGAAAAGATAATCATGGAAATGAAAACAACAACAATTTCTTCATGAGTGAGTCTTGTTACAAATTCACAGCATTCAATGGAGGCCCTCGCTTGTGCTTAGGCAAAGACTTTGCATACTATCAGATGAAGTATACTGTAGCCAGCATCATTCTCAGGTACCATGTTAAGGTGCTTGAGAATCACCATGTGGTTCCAAAGCTTGCATTGACTCTCTACATGAAGCATGGCTTGAAAGTCAACCTTCAGAGGCGTGACGTGGCAGATATTGAAAAGTACTTGCTTTAA 1680 0.4851 MHHHNNNNNHSFIVTKLATNNTSTNMMSFFSLLQHIHILELAIATTMFIALRAWCSKRHHGLPVWPVLGMLPSLIYGLKTNLFEWLSQVLIRQNGTFTFRGPRFAGLDCVITSDSRNIKHLLKTKFSSFPKGKFFRSTLRDLLGDGIFNADNETWQRQRKTASLEFHSATFRKLTAESLFELVHKRLLPLLESCVNKSRAIDLQDVLLRLTFDNVCMMAFGVDPGCSQPHMPEIPFAMAFEDATEISMRRFITPVWMWKLMRFLNVGAERRLKESIKKVDEFAESVIRTRKKELALQHEKSSDILTVFMRLKDENGMAYSDRFLRDICVNFILAGRDTSSVALSWFFWLLHENPKVEEKIVAEICSVVKQREGFKKEEVVGNGSCLAFWPEEIKKMDYLHAALSEALRLYPSVPVDHKETVEDVTFPDGTVVEKGTKVIYSIYTMGRMESIWGKDCREFKPERWLRKDNHGNENNNNFFMSESCYKFTAFNGGPRLCLGKDFAYYQMKYTVASIILRYHVKVLENHHVVPKLALTLYMKHGLKVNLQRRDVADIEKYLL 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0053 559 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 490 499 IPR017972 GO:0005506|GO:0016705
Aed6g0053 559 Gene3D Cytochrome P450 57 557 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0053 559 PANTHER BNAC02G41740D PROTEIN 25 550 - -
Aed6g0053 559 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0053 559 PRINTS E-class P450 group I signature 400 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0053 559 PRINTS E-class P450 group I signature 487 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0053 559 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0053 559 PRINTS E-class P450 group I signature 497 520 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0053 559 SUPERFAMILY Cytochrome P450 61 549 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0053 559 Pfam Cytochrome P450 64 534 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0053 559 PANTHER CYTOCHROME P450 25 550 - -
Aed6g0053 559 PRINTS P450 superfamily signature 401 412 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0053 559 PRINTS P450 superfamily signature 488 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0053 559 PRINTS P450 superfamily signature 497 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed6g0053 559 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0053 Aed-Chr6 618312 623674 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0053 32 557 Cytochrome P450 AT5G23190 67.424 0.0 742
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0053 K15402 - gmx:100787593 938.332