Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0039 ATGGAGCAGATCATAGAGAAGTACCAGAGATCAACAGGAGCTCGCATAGCAGCACGTGATCATCCCAATGTCCACGAAGAGTTTTTCCATGAAGTGGGAATGCTGAGGCAAGAAACCATCCGTCTAGAGTTGGAAATTCAACGTTATCTTGGAGAGGACATTGGAGGCTTACAATATGAGGATTTGACTAAGATTGAACATGAACTTGAAAACTCTGTGGAAAAGGTTAGAAACCGTCAGCTAATTTCCATGCAGAATGAGCTCTTGCAACAGCAGACGGAGAATCTGCGAAGGAAGGTAAGGATCTTGGAAGAGGAAAACAACAATCTGTCCAATTGGAATATTCATGAGGAACACCGAGCAGTGGAAGCAATTAGCAAACCAGAAATGCATCATGTGATGGATCAGTTCCCATTCTTTGAAGAGCAACCTGGTGTTGGGAGCATTCTTCAACTTGCTTCCCCTGTGCTTCCACACTTTCATCCCTATCTTCAGCTCGCACAGCCAAATATTCATCAAGACTCATCATCACTCAGGGGCCATCAGCCATAA 552 0.4438 MEQIIEKYQRSTGARIAARDHPNVHEEFFHEVGMLRQETIRLELEIQRYLGEDIGGLQYEDLTKIEHELENSVEKVRNRQLISMQNELLQQQTENLRRKVRILEEENNNLSNWNIHEEHRAVEAISKPEMHHVMDQFPFFEEQPGVGSILQLASPVLPHFHPYLQLAQPNIHQDSSSLRGHQP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0039 183 Coils Coil 86 109 - -
Aed6g0039 183 Coils Coil 59 79 - -
Aed6g0039 183 Pfam K-box region 22 111 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed6g0039 183 ProSiteProfiles K-box domain profile. 25 121 IPR002487 GO:0003700|GO:0005634|GO:0006355
Aed6g0039 183 PANTHER PROTEIN TRANSPARENT TESTA 16-LIKE ISOFORM X1 2 172 - -
Aed6g0039 183 PANTHER SERUM RESPONSE FACTOR HOMOLOG 2 172 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0039 1 177 MADS-box Gene Family AT5G23260 37.374 6.38e-26 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0039 - - gmx:100783876 213.001