Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0027 ATGTCCAACTCTGACGGAGCCACTAACGGCATCACCCCCAATGACACCAACGCAATCGTCGTCGAGTCCCAGCAGCAACGAACCACCACCACCCTAGCCGTCAAGAAACCGCCGTCCAAGGACCGTCACAGCAAAGTCGACGGCCGCGGACGCCGCATTCGCATGCCGATCATCTGCGCCGCGCGCGTCTTCCAGCTCACGCGCGAGCTCGGCCACAAGTCCGATGGCCAGACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCCTCCATCATCGCCGCCACCGGCACTGGCACCACCCCGGCGAGCTTCTCCACCGTCTCTGACCACAAGCCCCTCCTCCCTCCCCCGACCCCCTTCATCCTCGGCAAACGCATTCGCCCCGACGACGACTCCTCTAAAGACAACGCCGTCTCGCTCGTCGCCCCGCCCACGCCGCCCGCGCTCTGGGCCCTACCAACCCGCCCCGACTTCGGCCAGGTCTGGAGCTTCGCCGCCGCTGCGCCACACGAGCTCGTGTCGGTGTCTCAGCAGAATTCCATGTTTCACCATCACCACCACCAGCAGCAACAGCAGGCCGCCATGGGAGAGGCCTCGGCGGCGCGGCTCGGGAATTACCTCCCCGGCCACCTCAATTTGCTCGCCTCTTTGTCCGGCGGCCACGGGAATTCAGGCCGGCGGGATGACGAGCCTCGCTGA 696 0.6638 MSNSDGATNGITPNDTNAIVVESQQQRTTTTLAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTVSDHKPLLPPPTPFILGKRIRPDDDSSKDNAVSLVAPPTPPALWALPTRPDFGQVWSFAAAAPHELVSVSQQNSMFHHHHHQQQQQAAMGEASAARLGNYLPGHLNLLASLSGGHGNSGRRDDEPR 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0027 231 MobiDBLite consensus disorder prediction 177 197 - -
Aed6g0027 231 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 228 IPR005333 GO:0003700
Aed6g0027 231 ProSiteProfiles TCP domain profile. 39 93 IPR017887 -
Aed6g0027 231 MobiDBLite consensus disorder prediction 177 195 - -
Aed6g0027 231 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 1 228 - -
Aed6g0027 231 Pfam TCP family transcription factor 39 110 IPR017887 -
Aed6g0027 231 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0027 Aed-Chr6 417854 418549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0027 16 231 TCP Transcription Factor Family AT5G23280 63.404 2.14e-90 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aed6g0027 TCP 1.4e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0027 K16221 - gmx:100795254 373.629