Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0023 ATGGATAATACTCCAAGATTGCTTCAAACTGTTTCAAGCTTGTTTGTTGTGATGATTCTAAGCATTTCATCATTGGCCTCAGCATCTCTGAAAGTGGGTTTCTACAGCTCCACATGTCCATCAGCTGAGATAATAGTGAGAAGCGCAGGTTGTGATGGTTCTGTGTTACTAGCATCTGCACCGGGTAACCCAATAGCTGAGAGAGACCATTTCGTGAACAACCCAAGCTTACGTGGCTTCGAGGTGATCGAGGAAGCCAAGACCCAAGTAGAGGCAGCATGTCCTCAAACGGTGTCGTGTGCAGACATTTTGGCATTCGCAGCACGAGACAGTGCTAACAAAGTCGGCGGCATAAACTACGACGTTCCATCGGGACGCCGAGACGGCCGCGTCTCGATCGGCGCCGAAGTGCTAGACAACCTTCCTCCGCCATCCTTCAACGCCGCCGATCTCATCACTAACTTCGCAAAAAAAGGTTTGTCAGCAGATGAAATGGTGACACTATCGGGTGCGCATTCAATCGGCGTGTCCAGCTGCGGCGCCTTCTCGAACCGCCTATACTCTTTCAGCGACACGGTCACACAGGATCCATCGTTGGACCCTTCGTATGCCGAAGCGTTGAAAACCGTTTGTCCTCCGCCACCCCCAACGTCGAACCCGATCGTGTCTCTAGAACCTTCCACGCCGATTCGTCTGGACAGCAAGTACTACGAGGGGTTGATCAACCACCGCGGGTTGTTGACGTCGGATCAGACGCTGTACACGAGCCAGTCCACGAGGGAAATGGTTGTAAGCAATGCTAACAACGGTGCAAGCTGGGCTGAGAAGTTTGCCCTAGCAATGGTGCGCATGGGTTCTATTGAAGTGCTTACTGGCTCCGATGGTGAGATCAGGAAGCAATGCAGCTTTGTTAATTAA 918 0.5163 MDNTPRLLQTVSSLFVVMILSISSLASASLKVGFYSSTCPSAEIIVRSAGCDGSVLLASAPGNPIAERDHFVNNPSLRGFEVIEEAKTQVEAACPQTVSCADILAFAARDSANKVGGINYDVPSGRRDGRVSIGAEVLDNLPPPSFNAADLITNFAKKGLSADEMVTLSGAHSIGVSSCGAFSNRLYSFSDTVTQDPSLDPSYAEALKTVCPPPPPTSNPIVSLEPSTPIRLDSKYYEGLINHRGLLTSDQTLYTSQSTREMVVSNANNGASWAEKFALAMVRMGSIEVLTGSDGEIRKQCSFVN 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0023 305 PANTHER PEROXIDASE 50 303 - -
Aed6g0023 305 Pfam Peroxidase 49 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g0023 305 PRINTS Plant peroxidase signature 223 238 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g0023 305 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g0023 305 PRINTS Plant peroxidase signature 239 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g0023 305 PRINTS Plant peroxidase signature 279 292 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g0023 305 PANTHER PEROXIDASE 25-RELATED 20 49 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed6g0023 305 Gene3D - 49 305 - -
Aed6g0023 305 Gene3D Peroxidase, domain 2 142 284 - -
Aed6g0023 305 ProSiteProfiles Plant heme peroxidase family profile. 50 305 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g0023 305 PANTHER PEROXIDASE 20 49 - -
Aed6g0023 305 PRINTS Haem peroxidase superfamily signature 164 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g0023 305 PRINTS Haem peroxidase superfamily signature 225 240 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g0023 305 PRINTS Haem peroxidase superfamily signature 98 115 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g0023 305 PRINTS Haem peroxidase superfamily signature 116 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed6g0023 305 ProSitePatterns Peroxidases proximal heme-ligand signature. 164 174 IPR019793 -
Aed6g0023 305 SUPERFAMILY Heme-dependent peroxidases 30 305 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed6g0023 305 CDD secretory_peroxidase 31 304 IPR033905 GO:0004601|GO:0042744
Aed6g0023 305 PANTHER PEROXIDASE 25-RELATED 50 303 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0023 Aed-Chr6 395934 397121 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0023 28 305 Peroxidase AT1G05260 42.395 4.08e-73 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0023 K00430 - gmx:100792351 503.827