Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0022 ATGTCTGCAACATCCAAGGTCCTGCCTGCTCTACACTCTATCAAATCATTGCCTCCTGAGTTCAAGATTACTTCTGGTCTAATGGAAAACCATGGACATGCTAAGTTGAGAAGCAGTGATGCAATTGGATCAATTAGTCCAGAAAATGATGCTTTGATTGGGGAGGTTTCTGAGGAAGCTCAGAACTGTGCTGGTGATGTGGGTGTTTACGATGAGGACCTGGCGTACAGCAGAAAAGGTGTATCGTTAGAAGACAGGGCATCAGTTGCTGATGAAGACTTAGAATCTGTTCCTTTGCCCTTCCCATCAGTTTTGATGTCCACTAGGGAACGCAGGTGGAGTGATACAACACCTTATGCTTCAAAGAAGAAGCTTCAGTCTTGGTTTCAACTTCCAAATGGGAATTGGGAGCTGGGTAAGATAATAACAACTTCTGGAAATGAATCCATCATTTCATTGCCTGACGGAAAGGTTTTGAAAGTGAAAGAAGAAAGTTTAGTACCAGCAAATCCTGATATCCTTGATGGGGTGGATGACCTCATGCAACTTAGTTATTTAAATGAACCGTCAGTTTTATACAACCTGCAATATAGATACAATCAAAACATGATTTATACCAAAGCAGGGCCTGTTTTGGTTGCTGTAAATCCCTTTAAGAAAGTTCCTCTATATGGTAATGATTATATTGAAGCCTACAAGCGTAAAGCAATTGAAAGCCCTCATGTATATGCAATAACAGACACGGCCATCCGAGAAATGATACGGGTTATCATGTACATATTTAGTGGTGAGAGTGGAGCAGGGAAGACTGAGACAGCAAAAATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAGTATGAGATTTTAAAGACCAATCCAATACTAGAAGCCTTTGGTAATGCAAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGTGAAACTGGAAAAATCTCTGGTGCTAATATTCAAACATGGAAGCTAAACCTACAAAATGCCGAAGACTATAAATATCTGAGGCAGAGCAATTGTTATTCAATTACTGGTGTGAATGATGCTGAAGAATTTTGCACAGTCATGGTACACTATCTTTGTCTGTTCCATGTAGCCAAATTAATTGGCTGTGACATTGAAGATCTCAAGTTGACCCTATCAACTCGCAAAATGAAAGTTGGTAATGATATTATTGTCCAAAAGTTGACGCTATCACAGGCAATTGATGCAAGAGATGCTTTGGCAAAGTCAATATATTCATGCCTGTTTGATTGGTTGGTTGAACAGATAAATAAATCACTTGCTGTTGGCAAAAGACGTACTGGCAGATCAATCAGTATTCTAGATATATATGGTTTTGAATCTTTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAGAGATTACAGCAACACTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATATATTCAAGATGGCATTGACTGGGCTAAAGTCGATTTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAGAAGTATCAGAACCTTCCATTGCCTGTTTCTCCTCCATCACTGTACCCTTTCCCTGGTGTTACCCCTTATACTTGTTCCTCCACTCAGGTAACCTATGATACAACTGGATTTCTGGAGAAAAACAGAGATCTATTGCACTTGGATTCCATCCAACTTCTATCCTCATGCACATGTCCTCTTCCTCAAATATTTGCATCTCATATGCTCACTCAGTCTGATAAGCCGGCGGTTGGTCCCTTACACAAGTCAGGTGGGGCAGATTCCCAAAAGTTAAGTGTTGCAACAAAATTCAAGGGTCAATTGTTCCAACTGATGCAACGACTCGAGAGCACTACTCCACATTTTATTCGCTGCATTAAACCCAATAATCTCCAATCACCTGAATCATATGAGCAAGGGCTTGTATTGCAACAACTGAGATGTTGTGGAGTCCTAGAAGTAGTTCGAATATCGAGATCAGGCTTTCCAACAAGAATGTCTCACCAAAAATTTGCCAGAAGATATGGTTTTCTCCTCCTTGATAATGTTGCATCTCAGGAGCCACTTAGTGTTTCGGTTGCCATTCTTCATCAGTTTAATATTTTGCCTGAGATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGGCAGATTGGTGTGCTTGAAGATACTAGAAATCGTACCCTCCATGGCATTTTACGCGTCCAAAGTTGTTTCAGGGGTTACCAAGCACGTCATTCTCTGAAGGAGCTTCAGGGAGGAATCACTACTTTGCAGTCATTTATTAGGGGAGACAAAACCAGAAAGTCATATTCAGCTTTACTTAAGAGGCATAGAGCTGCTGTTATTATACAGAAGCGCATCAAAGCAGTATTTGCAAGAAACAAAATGAGGACTATTAGTGATGCTGCAATAGTCATACAAGCAGTTATTCGTGGTTGGTTGGTCAGAAGATGCTCAGGAAATATTGGATTTTTGAAATCTGGAGACATGAAGATGAAAGAGTCAGATGAGGTTCTGGTTAAGTCAACTTTCCTGGCCGAATTACAGCGCCGGGTACTTAAGGCTGAAGCTGCCCTGAGAGAGAAAGAAGAGGAAAATGACATCCTTCATCAGCGTCTCCAGCAATATGAGAACAGATGGTCTGAGTATGAGTTAAAGATGAAATCCATGGAAGAAGTGTGGCAGAAACAAATGAGATCCCTACAATCTAGCCTCTCCATTGCAAAGAAGAGCCTTGCTATTGATGATTCTGAAAGGAATTCAGACGCATCTGTTAATGCAAGTGATGAGCGGGATTTCAGCTGGGATGTGGGAGGTAATCACAAGCGCCAAGAAAGCAATGGGGCAAGATCAACAAGTGCTGGTCTAAGTGTTATAAGTCGGCTGGCAGAAGAATTCGAGCATAGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTTGAGGTAAAATCTGGTCAGGCAGAAGCAAGTTTGAACCCAGATCAAGAGCTTAGAAGGTTAAAACAAATGTTTGAAGCTTGGAAAAAGGATTATGGAGCAAGACTGCGTGAAACAAAAGTCATTTTAAATAAACTTGGAAGTGAAGATGGCGCACTTGAGAAAATGAAGAAAAAGTGGTGGGGAAGAAGGAACAGTACAAGGATAACTTGA 3210 0.4062 MSATSKVLPALHSIKSLPPEFKITSGLMENHGHAKLRSSDAIGSISPENDALIGEVSEEAQNCAGDVGVYDEDLAYSRKGVSLEDRASVADEDLESVPLPFPSVLMSTRERRWSDTTPYASKKKLQSWFQLPNGNWELGKIITTSGNESIISLPDGKVLKVKEESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAVNPFKKVPLYGNDYIEAYKRKAIESPHVYAITDTAIREMIRVIMYIFSGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTWKLNLQNAEDYKYLRQSNCYSITGVNDAEEFCTVMVHYLCLFHVAKLIGCDIEDLKLTLSTRKMKVGNDIIVQKLTLSQAIDARDALAKSIYSCLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNQDCLNLFEKYQNLPLPVSPPSLYPFPGVTPYTCSSTQVTYDTTGFLEKNRDLLHLDSIQLLSSCTCPLPQIFASHMLTQSDKPAVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTTPHFIRCIKPNNLQSPESYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLDNVASQEPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGYQARHSLKELQGGITTLQSFIRGDKTRKSYSALLKRHRAAVIIQKRIKAVFARNKMRTISDAAIVIQAVIRGWLVRRCSGNIGFLKSGDMKMKESDEVLVKSTFLAELQRRVLKAEAALREKEEENDILHQRLQQYENRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDFSWDVGGNHKRQESNGARSTSAGLSVISRLAEEFEHRSQVFGDDAKFLVEVKSGQAEASLNPDQELRRLKQMFEAWKKDYGARLRETKVILNKLGSEDGALEKMKKKWWGRRNSTRIT 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0022 1069 ProSiteProfiles Myosin motor domain profile. 175 744 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0022 1069 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 792 IPR027417 -
Aed6g0022 1069 PRINTS Myosin heavy chain signature 256 281 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0022 1069 PRINTS Myosin heavy chain signature 205 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0022 1069 PRINTS Myosin heavy chain signature 298 325 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0022 1069 Gene3D - 678 745 - -
Aed6g0022 1069 Gene3D - 797 839 - -
Aed6g0022 1069 Gene3D - 748 796 - -
Aed6g0022 1069 SMART MYSc_2a 169 745 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0022 1069 Pfam Myosin head (motor domain) 381 525 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0022 1069 Pfam Myosin head (motor domain) 551 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0022 1069 Pfam Myosin head (motor domain) 177 341 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aed6g0022 1069 Pfam IQ calmodulin-binding motif 820 836 IPR000048 GO:0005515
Aed6g0022 1069 Pfam IQ calmodulin-binding motif 750 766 IPR000048 GO:0005515
Aed6g0022 1069 Gene3D Kinesin motor domain 448 464 IPR036961 -
Aed6g0022 1069 ProSiteProfiles IQ motif profile. 818 847 IPR000048 GO:0005515
Aed6g0022 1069 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 122 171 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aed6g0022 1069 Gene3D - 467 524 - -
Aed6g0022 1069 Gene3D - 551 634 - -
Aed6g0022 1069 Gene3D Kinesin motor domain 635 677 IPR036961 -
Aed6g0022 1069 Gene3D Kinesin motor domain 127 358 IPR036961 -
Aed6g0022 1069 Gene3D Myosin VI head, motor domain, U50 subdomain 381 447 - -
Aed6g0022 1069 ProSiteProfiles IQ motif profile. 748 775 IPR000048 GO:0005515
Aed6g0022 1069 PANTHER MYOSIN 550 1068 - -
Aed6g0022 1069 Coils Coil 864 912 - -
Aed6g0022 1069 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 340 373 - -
Aed6g0022 1069 MobiDBLite consensus disorder prediction 959 973 - -
Aed6g0022 1069 ProSiteProfiles IQ motif profile. 769 798 IPR000048 GO:0005515
Aed6g0022 1069 PANTHER MYOSIN 377 525 - -
Aed6g0022 1069 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 377 525 - -
Aed6g0022 1069 PANTHER MYOSIN 9 340 - -
Aed6g0022 1069 PANTHER MYOSIN 340 373 - -
Aed6g0022 1069 SMART iq_5 817 839 IPR000048 GO:0005515
Aed6g0022 1069 SMART iq_5 768 790 IPR000048 GO:0005515
Aed6g0022 1069 SMART iq_5 745 767 IPR000048 GO:0005515
Aed6g0022 1069 SMART iq_5 794 816 IPR000048 GO:0005515
Aed6g0022 1069 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 9 340 - -
Aed6g0022 1069 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 550 1068 - -
Aed6g0022 1069 MobiDBLite consensus disorder prediction 937 973 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0022 Aed-Chr6 368841 387452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0022 6 1067 Myosins gene family AT1G50360 65.614 0.0 1488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0022 - K10357 gmx:100781736 1869.36