Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0017 ATGTGGCCTGCATTAGTAGCTAATAAGATTCTCAACAATCGACTGGGGAGCAGCAATACAGAATCCTTATTGGCTCATCGTCATCATCATCTCAGCTCCAAAACAATTCTTACTGATCACAAGGACACACAAAAATACAAGATTTTTGTCAGCACATGGAACATAGGTGGGATTGCACCAGATGAAGAACTGAATCTGGAGGATTTGTTGGAGACATGCAACAACAAGTCCTGTGACATCTATGTACTTGGGTTTCAAGAAATTGTGCCCCTAAAAGCATCCAATGTATTGGGGTACGAAAACAGTAAGAATATATCTGCCAAGTGGAACTCCATAATCAGAAAAGCTCTGAACAAATTAGATGATGATGAAAAGCGTAAGGAAGGAAATGATGATAATAATAATCCAGGTCAGCAGTACTGTGAAGCCCAACAAGATTTCGAATGTATCATGAGCAAGCAAATGGTTGGTATATTGATATCAGTATGGGCTAAGAGAGAGCTTCGTCCATTCATTCGACATCCAACTGGTTCTGTATCTGTGAGATTTGTGGTGCATGAAACAAGCTTTTGCTTTGTGTGTGGTCACCTAGCTTCTGGGGGAAGAGAAGGGGATGAGAAGCATAGAAACTCTAATGTTGCTGAAATATTTTCAAGAACAAGCTTTTCTAGAGGTCCTATGCTTGATTTGCCAAGAAAGATTCTTGATCATGAACACGTAATATTGCTTGGAGATTTAAATTACAGGATTTCTCTACCAGAAGAAACCACACGCTTACTAGTTGAAAATGAAGACTGGGATTCCCTGCTACAATATGATCAGCTAACGATGGAGCTAATGAGGGGAAACATATTAAAAGGGTGGCATGAAGGAGCAATCAAATTTGCCCCAACCTACAAGTATTGTCCAAATTCAGATTTGTACTATGGATGTTATTATCACGGGCAAAAGGCAGCGAAGAAGCGAGCACCTGCATGGTGTGACAGAATTATATGGTTTGGCAACGGTTTAAAGCAAATTCAGTATGCTAGATTCAGGATTATTCTAAGAGAGACATACATGGTTGAGAAATGTAGAGCTGCTAATGAGAGAGCCAAACAAATTCTAGAGAAGTGTGGATCAACGCTAATGGAAGTAGATGTTAATGGGACATTGTCATATTCTGAATCCCAGATGACTACAAAGTACAGTGGTAATTATTTTATGCCAGATGAAACACATTCTTTGGCAAAACCTCTTAGTATTGATCAAGAACAATTGGTAAGAATATTTTATGAAAATAAGATACTGCAAGGATGTGGAAAGTTCCCCATGTTGCCTCCTAAGATCCAGGCAACAGCCCTTATCTTTCTTAAAAGATTCTATCTGCAATGGTCCGTGATGGAACATAAGCCAAAGTATATAACGTCGACCTGCATATATGCTGCTTCTAAGATAGAAGAATATTATGTAGCTGCTGAGGAGCTTAGTAAGGCTGTGGATGTACAGGATCATCAAATGATTCTCAAATACGAGATGATGAGTTTGGGATTTGATCTCATTGTTTACACACCATATCGCTCAGTCAAAGGTTTTATAAATGATATGGAGACACAGGCATTCTGCAATTGCAATGCTGTTGATGATCAGCTTCAAATGCTCAAGACTTTGCAAGAAAAAGCGGAATTGGAAGTTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGGGCAGAATGACCTTGGTTTTGATATTGTAGTATATTTTTTTACCACTGCTCGGTCATTTACCCTTTACACTTGCAGTTATCTTAGGAGCATTTGTTCCCGCCGTCAGAGTTCCATGCATACAATGTCTGAGCTTTCTGAATCACTGAATGCAATTGATTCTTGGGTAATTGATCCTCATTCTAATATGGAGGTTAGAAACTACGAGTGTCCTCCTAAGAAGGTATTGAGGCCTATCAATGAAAAGCTGACTTCTTGTTGGGGTTTGAGATCTCACGACGAGGTCAAGAAGTGGGAGAAGAAATCAAAGCACAAGTCCGAAAAGAAATCAAAGCACAAGTCAAAGCACAAGGGTGTGAAAAAGGAGGGCATTCAAATGCTCTTCTTCCTCTTGACTGTGAGTCAAAACATGTTAGTGAAAATAGATGGTATTAATGTGTACTTCTCCGGTGAAGAAATCAAACCGGAGCAACTACAATATATGAAGTATTTGAAGAAAGTGTTAGATTCTAAAGGTCATGGAGTTCTTCAAATGGAGAAGGGAAAGGGGAGGAGCGCTGCACTCGTCTCCTTCGTGACGAGCTACAGGTTGTCAAAGCCTGAGCATGCTCACCTCAAGCTTATATACTGCACCTCTAACATGGATGAAATGGAGAAGATCTTAGCTGAGCTGAAGATGGTGTACCAACTCCAGCAACAATTTCTTGGTGAGGATGCAACCATGTTGGCCATTGGATTTGGTCCTCGTATACAACTCTGCATCAACTTTGAGGTGTCATTCTTTCCTATCAGTAAGGAAATCGTAGATTTAGAGTGTGTTTCCAGAACTTCTAGTTGGGTAAGAGAACTTGATATAGAGGATGCTCACATGGGGAGTTGCTCCTATTACAAGAACTATGAGACTCACAGGCCTGTTTTAGAACCGGGTGTCTACACTCTTAAGGACCTTAAAAACTTGGGAGAGGATGAATATGATGAAGATGATGAAGATGATGGTATTTGTCCTTATTACATGGCATTGGATGCCTTGGAGGCTGCCAATGTGGTAGTACTATGTGGCCACGACTATTTGTTAGATCCAAAATTTGCTGGAATAATATCGGGAAAATTGAAGAATGAAAGCTTAGTTGTATTTGATGATGCTGATAACCTTCCAGACATTTGCACCAAAACATTTAATGTCACTTTAACGAGACGTCTTCTTGAACAAGCTGACACGTTTGTGATAAAGATGCGTTCGGAGGTTAAGAGATACCTTTGGCCGCTAACGTGGGAAATTAAGGATACTAATGATGAGCGATCCCTCCGTAGCTTGGTTGAACATTTTCAACCTCCCCTTGATTTAACAAGCTTGAGGTTCTTTTACCTATGCTTTCACTCATTGATCTCCGCCTTAAAAATTAAGGAACTTACACTTCATTACTTGTATATTCCATTTTTTTGTGATTTTGCCACACTCTTGGGCATCTATGTTGATGTTGATGGCTTTCGTATTAGAAGAAGTCCCATTAACATAGGAATCACTTATGACCATGAAGTGAAGCTCTGTTGTGATGACCCTTCTCTTGCCATGAAAGCTGTTTTCGACCGATTTCAGTCGGTTATCATCACAGGCACCACTGGAACCTCTTATGCCATTGGTCGATATCCTGAGATCCTCAAGTTCACACCTATTGTGTCTCGACCCATTGGTGAAGGAGGCAACAGCCCTCAAGGCAAAAAGCGGGAGAAGAAATCAAAGCACAAGTCTGAAAAGAAATCAAAGTACAAGTCGGAAAAGAGCTCAAATGAAGTTGAGAAACGTAGAGCTGTTAACGAGAGAGCTAAACAAATTCTAGAGAAGTGTGGATCAACGCTAATGGAAGTAGATGTTAATGGGACATTGTCATATTCTGAATCCCAGATGACTACAAAGGACAGTGATGAAACACATTCTTTGGCAAAACCTCTTAGTATTGATCAAGAACAATTGGTAAGGATATTTTTTGAACATAAGATACTGCAAGTATGTAAAAAGTTCCCCATGTTGCCTCCTAAGATCCAGGCAACAGCCCTTATCTTTCTTAAAAGATTCTATCTGCAATGGTCCGTGATGGAACATAAACCAAACTATATAACGTTGGCCTGCATATATGCTGCTTCTAAGATAGAAGAATCTTATGTAGCTGCTGAGGAGCTTAGTAAGGCTGTGGATTTACAGGATCATCAAATGATTCTCAAATACGAGATGATGAGTTTGGGATTTGATCTCATTGTTTACACACCATATCGCTCAGTCAAAGGTTTTATAAATGATATGGAGACACAGGCATTCTGCAATTGCAATGCTGGTGATGATCAGCTTCAAATGCTCAAGACTTTGCAAGAAAAAGCGGAATTGGAAGTTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCTTTGCGCCGCACAAATGCACTCCATAAGGTCATTGACTTTGACAGTTATCTTAGGAGCATTTGTTCCCGCCATCAGAGTTCCATGCATACAATGTCTGAGCTTTTTGAATCACTGAATGCAATTGATTCTTGGATGGAGGTTAGAAACTACGAGTGTCCTCCTAAGAAGGTAACGAGGCCTATCAATGAAAAGCTGACTTCTTGTTGGGGTTTGAGATCTCACAACGAGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAGTCCGAAAAGAAATCAAAGCACAAGTCGGAAAAGAGCTCAAATGAACAAGTCATGAGAACGAGCTGTAGCCCTGCAGCTGCAAGAGAAAGCAACCTGCAGAATAACTAG 4533 0.403 MWPALVANKILNNRLGSSNTESLLAHRHHHLSSKTILTDHKDTQKYKIFVSTWNIGGIAPDEELNLEDLLETCNNKSCDIYVLGFQEIVPLKASNVLGYENSKNISAKWNSIIRKALNKLDDDEKRKEGNDDNNNPGQQYCEAQQDFECIMSKQMVGILISVWAKRELRPFIRHPTGSVSVRFVVHETSFCFVCGHLASGGREGDEKHRNSNVAEIFSRTSFSRGPMLDLPRKILDHEHVILLGDLNYRISLPEETTRLLVENEDWDSLLQYDQLTMELMRGNILKGWHEGAIKFAPTYKYCPNSDLYYGCYYHGQKAAKKRAPAWCDRIIWFGNGLKQIQYARFRIILRETYMVEKCRAANERAKQILEKCGSTLMEVDVNGTLSYSESQMTTKYSGNYFMPDETHSLAKPLSIDQEQLVRIFYENKILQGCGKFPMLPPKIQATALIFLKRFYLQWSVMEHKPKYITSTCIYAASKIEEYYVAAEELSKAVDVQDHQMILKYEMMSLGFDLIVYTPYRSVKGFINDMETQAFCNCNAVDDQLQMLKTLQEKAELEVDKMMLTDAPLLFPPGQNDLGFDIVVYFFTTARSFTLYTCSYLRSICSRRQSSMHTMSELSESLNAIDSWVIDPHSNMEVRNYECPPKKVLRPINEKLTSCWGLRSHDEVKKWEKKSKHKSEKKSKHKSKHKGVKKEGIQMLFFLLTVSQNMLVKIDGINVYFSGEEIKPEQLQYMKYLKKVLDSKGHGVLQMEKGKGRSAALVSFVTSYRLSKPEHAHLKLIYCTSNMDEMEKILAELKMVYQLQQQFLGEDATMLAIGFGPRIQLCINFEVSFFPISKEIVDLECVSRTSSWVRELDIEDAHMGSCSYYKNYETHRPVLEPGVYTLKDLKNLGEDEYDEDDEDDGICPYYMALDALEAANVVVLCGHDYLLDPKFAGIISGKLKNESLVVFDDADNLPDICTKTFNVTLTRRLLEQADTFVIKMRSEVKRYLWPLTWEIKDTNDERSLRSLVEHFQPPLDLTSLRFFYLCFHSLISALKIKELTLHYLYIPFFCDFATLLGIYVDVDGFRIRRSPINIGITYDHEVKLCCDDPSLAMKAVFDRFQSVIITGTTGTSYAIGRYPEILKFTPIVSRPIGEGGNSPQGKKREKKSKHKSEKKSKYKSEKSSNEVEKRRAVNERAKQILEKCGSTLMEVDVNGTLSYSESQMTTKDSDETHSLAKPLSIDQEQLVRIFFEHKILQVCKKFPMLPPKIQATALIFLKRFYLQWSVMEHKPNYITLACIYAASKIEESYVAAEELSKAVDLQDHQMILKYEMMSLGFDLIVYTPYRSVKGFINDMETQAFCNCNAGDDQLQMLKTLQEKAELEVDKMMLTDAPLLFPPGQLALAALRRTNALHKVIDFDSYLRSICSRHQSSMHTMSELFESLNAIDSWMEVRNYECPPKKVTRPINEKLTSCWGLRSHNEGKKREKKSKHKSEKKSKHKSEKSSNEQVMRTSCSPAAARESNLQNN 1510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0017 1510 MobiDBLite consensus disorder prediction 1466 1481 - -
Aed6g0017 1510 SUPERFAMILY Cyclin-like 518 660 IPR036915 -
Aed6g0017 1510 SMART deadxpd 716 1005 IPR006554 GO:0003678|GO:0016818
Aed6g0017 1510 CDD CYCLIN 422 507 IPR013763 -
Aed6g0017 1510 SMART cyclin_7 428 510 IPR013763 -
Aed6g0017 1510 SMART cyclin_7 1236 1319 IPR013763 -
Aed6g0017 1510 CDD CYCLIN 1231 1316 IPR013763 -
Aed6g0017 1510 SUPERFAMILY Cyclin-like 406 515 IPR036915 -
Aed6g0017 1510 Pfam DEAD_2 781 971 IPR010614 GO:0003677|GO:0003678|GO:0005524
Aed6g0017 1510 MobiDBLite consensus disorder prediction 1490 1510 - -
Aed6g0017 1510 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 26 345 - -
Aed6g0017 1510 Gene3D - 723 1007 IPR027417 -
Aed6g0017 1510 MobiDBLite consensus disorder prediction 1460 1510 - -
Aed6g0017 1510 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 715 1010 IPR014013 GO:0005524
Aed6g0017 1510 SUPERFAMILY Cyclin-like 1215 1324 IPR036915 -
Aed6g0017 1510 Pfam Cyclin, N-terminal domain 439 507 IPR006671 -
Aed6g0017 1510 Pfam Cyclin, N-terminal domain 1219 1316 IPR006671 -
Aed6g0017 1510 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 26 345 IPR045849 GO:0004445|GO:0046855
Aed6g0017 1510 Gene3D - 1213 1323 - -
Aed6g0017 1510 Gene3D - 404 514 - -
Aed6g0017 1510 SMART i5p_5 44 356 IPR000300 GO:0016791|GO:0046856
Aed6g0017 1510 MobiDBLite consensus disorder prediction 1135 1174 - -
Aed6g0017 1510 SUPERFAMILY DNase I-like 43 346 IPR036691 -
Aed6g0017 1510 Gene3D Endonuclease/exonuclease/phosphatase 28 354 IPR036691 -
Aed6g0017 1510 Pfam Cyclin C-terminal domain 1327 1428 IPR031658 -
Aed6g0017 1510 SUPERFAMILY Cyclin-like 1327 1458 IPR036915 -
Aed6g0017 1510 Gene3D - 1325 1434 - -
Aed6g0017 1510 Gene3D - 516 629 - -
Aed6g0017 1510 MobiDBLite consensus disorder prediction 1160 1174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0017 Aed-Chr6 222197 284844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0017 339 646 Core Cell Cycle Gene Families AT5G27620 45.338 7.10e-70 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0017 - - gmx:100817707 573.163