Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed6g0011 ATGTTTCCTCCGGAGAATCATAGTAACGGCTACCAGCAGGGTCCGCCGCCGGGGATGGGTTACAGAGAGCGTGTCCGTCGCGGCACTCGCAGGTCACGTGCCTCCACTTCCTCACACTCACACTCCGTTAGGGTTTATGACCAACAACAACAACAACCACCGCAGCAACATCGACCTCCTTGCACCGATTTCGACGTCGCCTATTTCCATTCCTACGCTCACCTTGGCATCCACCAAGAGATGATCAAGGATCGTGTGCGTACTGAAGCTTATAGGGATGCAATCATGCAGCATCAGAGTCTCATTGCAGGCAAAGTTGTGGTTGATGTTGGATGTGGTACAGGAATCCTTTCTATATTTTGTGCTCAGGCTGGTGCAAAACGGGTGTATGCAATTGATGCCAGTGACATTGCCCTGCAGCAGGCAAATGAAGTTGTGAAAGCGAATAACTTGTCTGATGTTATTGTTGTATTGCATGGGCGAGTTGAGGATGTTGAAATTGATGAAGAGGTGGATGTTATAATTTCAGAATGGATGGGCTATATGCTTTTATATGAGAGCATGCTTGGAAGTGTTATTAATGCCAGAGATCGTTGGCTCAAACCTGGTGGTCTTATTCTTCCTTCAAGTGCATCGTTTGACCTTTTGTCGTCTTATAAAATGCTCCTTGGTGTACTTTTCCAGTTGTACATGGCTCCTGTCACGCATACGGACAGATACACTGATAGTGTTGACTTCTGGCGTGATGTTTATGGAATTGATATGTCTGCCATGGTATCACTAGCTAAACAATGTGCATTTGAAGAACCTTCCGTGGAGACAATAACTGGTGAAAATGTTTTGACATGGCCACATGTGGTAAAATTTATTGATAGTTATTCTGTCACCATCCAAGAGTTAGAATCTGTAACAGCCAAGTTTAAGTTCAATTCTATGATGCGAGCACCACTACATGGTTTTGCATTTTGGTTTGATGTTGAATTCAATGGGCATGCAATAGCATCAACCAATTATCATTCAACAACTTCATTTATAGACAATCAACAGATGAATGGTAGTCAGAGGAAAAAACGAACAAATCCAAATGAAGCACTGGTCTTGTCCACTGCACCCGAGGACCCTCCAACACATTGGCAGCAGACATTGATATACTTTTATGATCCTATTGAGCTGGAACAAGATCAACTAATTGAAGGTTCAGTGACATTGTCACAAAGCAAAGAAAATGCTCGATTTATGAATATTCACCTTGAATATACTTCAGGTGGTCGATCGTATGTGAAAGAGTCTGTTATGAGATGA 1302 0.4309 MFPPENHSNGYQQGPPPGMGYRERVRRGTRRSRASTSSHSHSVRVYDQQQQQPPQQHRPPCTDFDVAYFHSYAHLGIHQEMIKDRVRTEAYRDAIMQHQSLIAGKVVVDVGCGTGILSIFCAQAGAKRVYAIDASDIALQQANEVVKANNLSDVIVVLHGRVEDVEIDEEVDVIISEWMGYMLLYESMLGSVINARDRWLKPGGLILPSSASFDLLSSYKMLLGVLFQLYMAPVTHTDRYTDSVDFWRDVYGIDMSAMVSLAKQCAFEEPSVETITGENVLTWPHVVKFIDSYSVTIQELESVTAKFKFNSMMRAPLHGFAFWFDVEFNGHAIASTNYHSTTSFIDNQQMNGSQRKKRTNPNEALVLSTAPEDPPTHWQQTLIYFYDPIELEQDQLIEGSVTLSQSKENARFMNIHLEYTSGGRSYVKESVMR 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed6g0011 433 MobiDBLite consensus disorder prediction 35 58 - -
Aed6g0011 433 Pfam Ribosomal protein L11 methyltransferase (PrmA) 103 179 - -
Aed6g0011 433 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 65 433 IPR025799 GO:0016274|GO:0018216
Aed6g0011 433 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 71 423 IPR029063 -
Aed6g0011 433 Gene3D - 228 432 - -
Aed6g0011 433 PANTHER BNAC03G41340D PROTEIN 18 430 - -
Aed6g0011 433 Gene3D Vaccinia Virus protein VP39 62 208 IPR029063 -
Aed6g0011 433 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 18 430 IPR025799 GO:0016274|GO:0018216
Aed6g0011 433 CDD AdoMet_MTases 107 207 - -
Aed6g0011 433 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed6g0011 Aed-Chr6 162702 173025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed6g0011 68 400 C2H2 Transcription Factor Family AT3G12270 37.752 2.66e-64 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed6g0011 K11437 - gmx:100809174 714.531