Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2671 ATGGCAGACACAAATACAAACTCAGTTGATGTGATTTTGGACTTTCTCAGGAGGAATCGATTCACCAGAGCTGAGGCAGCTTTGCTCAGTGAGATCAATAATCGTCCCGACTTGAATGGCTTCCTTCAGAAGCTTACCTTGGAAGAAGAAAATACTAAGGGGAGGAAGCCTCAAGGGTTGGAATCTCCTCATGAACTGATTGTCAAGGAAATCGAGTGCAAATGGAAAGCTGCTGCTGCTGCTGTTGCTCCCTCTGTGGTTGGGACAGGTGACAACAACTTTCTTTTCTCGGAGGAGGATTTATACCCGTGGAAGTTCAACCCCAGCAATGGTCCTGTGCCTGTGGAGCCTTACCAAAACGATGGTGGAGGTAGAGCTATTAATACTTTGACTTTGAAGCAATCAAAATGTCAAACTAATGAAGCTGTTGATGTAATCACAGCCTATACCAATTCAAAGTCCGGGGAGGAAATGTGGCCTGGAAGTAGTAGTAAAGCCTCTGTGTACGACCCTGTGCAATGCAAAGAACCTATGGAACTTGACCGGCAACTTAAATTCAATAGCTCATCTCTTAAAGTGAACTTTACACATAACCCCTGGTCAAGAACAGACGAGAATGTGAATTCGTCTTCAGACTCAGGCAAAGATTGTTCTGTCAAGACTGTCTTCCCCTTCTCAAAAGGGGATGTGTCTACAAGCTTTGATGGTGCCACTTACTCTGACAAAAAAGAGGACAAAAAAACAGAAATTAGTGATACTAGAACATCTATAAAAGAGCAGGTGGGTGAATTGGGGACGCCTATTTACTTGGTCAAGGCACCAGGCAGTTCTGAACAGAAGATGATTGGCAGCTTAAGTTTTCCTCTTCCCCCTGAAAATCAGAGGGAAGAGTTTCCTAGGCTTCCTCCGGTTAAACTCAAGTCAGATGATAAGCCCTTGGTTGTTAATTGGGAGGAGAAGTTTGAGCGAGATGGACCAACTTCAAAACTCCCTGTTGCTGACAGCACTTTGCTTATTGGTTCATATCTGGATGTACCTATTGGACAAGAAATTAACCCTTCAGGTATGAGAAGGGCTACAGGGGGAAGTTGGTTATCTGTAAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTATCAGGATTTGCTACAGTTGGTGATGGGTTGAGTGAATCTATTGACTATCCGAATGAATATTGGGACTCTGATGAATATGATGATGATGAGGATGTTGGGTACATGAGACAACCCATTGAGGACGAGGCCTGGTTTTTGGCACATGAAATTGATTACCCTAGTGACAATGAAAAGGGGACTGGGCATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCAGCCAAAGATGAGGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTCTCCGGGGAGCGATATCTTCAGGCAAATAATGTTGAACCAATCACAGCTACTGATGACCCTATTGGTCTAACAGTTACTGAGTATGGAAGGACTAATGATAATGATTTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAGCTGAACCTGATGTGTGCAGAACCAGTCTGGCGGGGTTTTGTCCCTCAGACAAATGAACTCATCATGCTAGGAGATGGGAGGGTTTTGAATGATAATGTAAGATCACGGCTAGAGGACATCAGTATGGATGATGATCAACATGGTTCAGTTAGGTCAATTGGGGTAGGGATCAACAGTGATGCTGCAGATATTGGTAGTGACGTGCATGAAAGTTTGGTTGGTGGTAGTAGTGAAGGGAATTTAGAATATTTCCGTGATCGTGATGCAGGACTTGATGGTTCCAGGCACTTTCATCATGATTTGGATAAGAAATCTACTAACAAATCAAACAAAAACAAGAACAACAAAAAGAGTGAGTCAAATAAATATGTTATAGGATGTGATAAAGAAGCACTGTTGCAGATGAAAACTCATGGTGATGGAAACTTCTCATTTCCCCTATCTTTGAAGGATGGTCAGATGATTCAGGCTTCCACCAATAAGTCCCCTTGGTCAAATAACGGCAACACAGATGAAGCTGATGACTGTCTTAGTGCATTTGTGGGAACTGATGACATGCTTGCTTCGTGGAGGCGAAAGAGCAGTGATTCGTCACCTGTTAAAAGTTCTAGGGATGAGAATAATGCCAACATTGTAAGATCCACAAACTCTTCTCCGACAACAGTCTCAAATTATGGGTATTCTGAAAGAGAGCATGTGAAAGTAGAAGAGGATGAAAATCTAGGAGCATCGCTAGAGGATGAAGAGGTAGCTGCTGTGCAAGAGCAAGTAAGGCAGATAAAGGCACAAGAGGAGGAATTCGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGGCATGTTTTTAATGTGTTTTTTTCGTTGCTCAGAACTGGCTTTGAGGAGGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCCGGAAGGTATCATGTTACTGAGTATTTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTACATACAGGGATGGACGTTTGTGTTAAAATTATAAAGAACAACAAAGACTTTTTTGACCAAAGTCTTGACGAGATCAAGCTTCTCAAGTATGTCAACAAGCATGATCCTGCAGACAAGTATCACATTCTTCGATTGTATGATTATTTCTATTATCGAGAACATTTGTTAATAGTATGTGAACTACTTAAAGCAAACTTGTATGAGTTTCATAAATTTAATAGAGAATCAGGTGGTGAAGTGTACTTTACAATGCCAAGATTGCAGTCAATTACCATTCAGTGTTTGGAAGCTGTTCAGTTTTTGCATAGCCTTGGATTAATACACTGCGACTTGAAACCAGAGAATATTTTGGTTAAAAGCTACAGTAGATGTGAGGTGAAGGTCATTGATCTTGGAAGTAGTTGTTTTGAAACAGATCACCTTTGTTCTTATGTTCAGTCAAGGTCCTATCGTGCTCCTGAGGTTATTTTGGGACTTCCATATGACAAGAAAATTGATATCTGGTCACTTGGCTGCATCTTGGCAGAACTTTGTACTGGAAATGTCCTCTTCCAAAATGATTCACCTGCAACATTACTTGCTCGGGTGATTGGGATCATTGGTCCAATTGATCAAAGTATGCTTGCAAAAGGACGGGACACATACAAGTACTTCACCAAAAATCACATGCTTTATGAAAGGAATCAGGAAACCAACCGATTGGAATACTTGATTCCGAAAAAGACATCCTTGAGGCATAGATTGCCAATGGGAGACCAAGGCTTCATTGACTTTGTTGCTCACTTGCTTGAAGTCAACCCTAAGAAGCGACCCTCTGCATCTGAGGCCCTGAAGCATCCATGGTTGTCATATCCATATGAACCCATATCATCTTGA 3426 0.4165 MADTNTNSVDVILDFLRRNRFTRAEAALLSEINNRPDLNGFLQKLTLEEENTKGRKPQGLESPHELIVKEIECKWKAAAAAVAPSVVGTGDNNFLFSEEDLYPWKFNPSNGPVPVEPYQNDGGGRAINTLTLKQSKCQTNEAVDVITAYTNSKSGEEMWPGSSSKASVYDPVQCKEPMELDRQLKFNSSSLKVNFTHNPWSRTDENVNSSSDSGKDCSVKTVFPFSKGDVSTSFDGATYSDKKEDKKTEISDTRTSIKEQVGELGTPIYLVKAPGSSEQKMIGSLSFPLPPENQREEFPRLPPVKLKSDDKPLVVNWEEKFERDGPTSKLPVADSTLLIGSYLDVPIGQEINPSGMRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESIDYPNEYWDSDEYDDDEDVGYMRQPIEDEAWFLAHEIDYPSDNEKGTGHGSVPDPQERGPAKDEDDDQSFAEEDSYFSGERYLQANNVEPITATDDPIGLTVTEYGRTNDNDLMAQYDGQLMDEEELNLMCAEPVWRGFVPQTNELIMLGDGRVLNDNVRSRLEDISMDDDQHGSVRSIGVGINSDAADIGSDVHESLVGGSSEGNLEYFRDRDAGLDGSRHFHHDLDKKSTNKSNKNKNNKKSESNKYVIGCDKEALLQMKTHGDGNFSFPLSLKDGQMIQASTNKSPWSNNGNTDEADDCLSAFVGTDDMLASWRRKSSDSSPVKSSRDENNANIVRSTNSSPTTVSNYGYSEREHVKVEEDENLGASLEDEEVAAVQEQVRQIKAQEEEFETFNLKIVHRKNRHVFNVFFSLLRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEAVQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSASEALKHPWLSYPYEPISS 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2671 1141 Gene3D Transferase(Phosphotransferase) domain 1 884 1132 - -
Aed5g2671 1141 CDD PKc_DYRK_like 830 1132 - -
Aed5g2671 1141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 956 968 IPR008271 GO:0004672|GO:0006468
Aed5g2671 1141 MobiDBLite consensus disorder prediction 612 639 - -
Aed5g2671 1141 Coils Coil 771 791 - -
Aed5g2671 1141 ProSiteProfiles Protein kinase domain profile. 830 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2671 1141 MobiDBLite consensus disorder prediction 431 464 - -
Aed5g2671 1141 Pfam Protein kinase domain 830 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2671 1141 PANTHER DUAL SPECIFICITY PROTEIN KINASE 236 1139 - -
Aed5g2671 1141 SUPERFAMILY Protein kinase-like (PK-like) 819 1134 IPR011009 -
Aed5g2671 1141 MobiDBLite consensus disorder prediction 710 744 - -
Aed5g2671 1141 MobiDBLite consensus disorder prediction 709 744 - -
Aed5g2671 1141 PANTHER - 236 1139 - -
Aed5g2671 1141 SMART serkin_6 830 1132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2671 1141 Gene3D Phosphorylase Kinase; domain 1 824 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2671 Aed-Chr5 27222245 27232611 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2671 829 1127 MAP Kinase Gene Family AT5G19010 31.034 1.50e-29 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Aed5g2671 Pkinase 1.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2671 - - gmx:100797095 1876.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2671 5 27222245 27232611 Aed5g2671 5 27222245 27232611 ECH