Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2670 ATGGCCAAGAGATCGGATTTTGCACAGAAGCTACTTGATGATCTGCGCCTAAGGAAAGAACGAATGGCTTCATCTCACACTCACAGCTCCATGTCAAACCAATCCCACCATTTGCCTATAGATGCATATGCTTACACGAAACAAACATACAGAGGATCCAGAAATACAAAAGCTACTGAAATTGTTAGTTCCAGAACAGGGGAGATGCTGAATAGTTCTAGCAGAAGCCACAGATCAGTAAACAACGGACAAATATTCAATCAGATGGTTTCATATGGGAAAGGTCAGAGCTCAAGGCAAACGGGTGATATGTCCCTTGCCCTGGCTTTTGCATTTGAGAATGGAGGGAGACTAAGAAGAAATGATTCAATTATGGGTTTCCTTCACCAAATTAAAAGGGGAACATTGGAATTCAGCACTTCAACTAGCAACTATCCTATGCAAATAAACGAGATATCCAAAGGTGCACAAAAACTAAACCAGATATTGAGAGCTTGCTCCAATGGTCTAAACATGGACTCATATTCAATACAATTTGCGAAGGAACTATTACAAGGAGCGGTTGATTTGGAAGAGTCCCTCAGGATGCTAGTAGACCTGCAAAATAATTCACAGAAGAAAAATCGAATCACACTATTAGAGGAGGATAACGATGACAATGACAATGACAATGGCAATGACACAGACACAGGGATGGAAATGCAACTGGCACGACCAACCTTCTCTTTTGACGAGAACATCCAACAACTTGGAAAGGCTATTTTCATGCAGAGGCCAATTACTCTTACCAGCTCTAAGGAAGGCAGAAACTCAAATATGAAGAGACAAGTTTCTCAGAAGCGATCCACTAAAACTACTTCTACCTGTGAAGGGAAAAACCAGACGGAGAAGGGCAGGATTCCAAATGTAATAGCCAAATTAATGGGGCTGGACATCCTTCCTGTTCCTGACAAAGTGGAAAAGGAACCGATGATGCGAGAAGGAAGCACTAAGAAAACTGAACTGAAGAGCAAAAAAGAGAAAAACCAAAAAGTGATAGAAGCCTTCAAAGTGCCTGTTCGGAATGGAAAACCACTATGGAGGGACCTGGATGGAATCAAAGAACTGAAAGAATTTGATAAACCCAACATAAAAATTGACAAGCCTGCAAAAAGTTCCCCTCAAAAGAACCTTAACAGGCTTAACAGGGAACAGGAAGGCACAGTAAAGGGCAGAACCAACGATCCAATTCTCAACAATATGCTGTCCCAGCTGGAACAAGTGCATGAAAGATCACAAGTTAAGTCCTCAATTCAGGAAATCAATGGTAATACTCTTCAACCTGAAAAAAGACACACAAACAAGCACGTCATGAACAATGAAAAGAAGCCTCGGAACAATGTTGGAGTCCAAAAGTCATACGTATCCTCCAAAAATGGGCCTCATGAAGATGAAGAAAAGCATCATCGCAGAGAACAGCAACTCCAGCTGCTGACGAGACCACAAGGAGGGAGTGAAATGACATCCAAGAATTCACTAAAATCCCCTCATCAATTGATCAATACTCAGAAGAAGCAGCTATCCATGAACCAGGTCACACTGTTTAAGAAAAACTCTGGAGAAAAAAATGTTGCTTCTATGAAATCGGAAGGTTTCTTAACTAACCACTATAATCTAGTCAGAGATGAAGCATCCAATGACACATATGATAAAGTAAGAGAAATTATCCGTAGGAAGTCAGATCAAATTTCCTCTCCAAGAGATCAAGAATTTGAACGAGCTAAGCGAAGTGGCATCAAAACTTTGGTGGATGAAAAACACTTCAATAAACTGGCCAACAAGAAAATAAAGAATACTAGGCAGCAAAAAGTTGACATGCCTGGAAGAAATGGAGCCAAGCTCATCACTAAACAAGGAAAACAAAAGATTCCCATTCCTGACAAATTCAAAGTTTTGAATGAAGCAGAACATGAAAGGGTTAGCATGCTCAGAGAAACAGATGCGCGCATCATTAACTCCAATGAACCAGTATCTGTAGCTGTGAGGCACCAGCCCCATAAAGAAGCTGAACTGTCTCCTATATTATCCAGTTCTGTTGGTGGAGAACTTCAAAGCCAACAAGAATTGGTAGCAATAGTTCCCAATGATTTGCATTGCCAAGATGTGCAAGATCAAGCTGTTCCTGTGGCAGCAGGTGAAGGATTCGTAACTGGTGAAGTCGCATTACATAAAACAAATGGTGAGCAGCTGAATAAAGACATGGAGAAGCTTAAAAAAAGTTGCCAAGCTGATCATGTTGAGGACTACCTGCCTAAAATGCTTGAGCATGATGTTTATGATAGAGATCCAGACTTGAACTGCATGTGGGATTTAGGTTGGAATGATGAGACAGTTGCATTTATCGAAAAATATGATGTTATAAGGGATACAGAAAAGCATATCCTTAGTGTTCTTCTGGATGAGATCACAGTAGATTTTTGCAGCATGAAGGGCATGGCATTGACATCATCCTTAGAGTTCCTGACGAAGAAGCCTTACAGTCCTCCATCCTGGGCATCCCATCTCCATCCTTTACCTTCTCACGTCTTCTCTCTTGCACATCTTCCCACTCCAATTCACAGATGGAACATTCCCAATCTTCCCAACAATACGGAGCTGTGGATCAAGCGAGACGACCTTTCCGGAATGCAGCTGAGTGGAAACAAAGTGAGGAAATTGGAGTTCCTGATGGCCGATGCCATTGCTCAGGGTGCCGACTCTATCATTACAATCGGAGGCATTCAGAGCAACCACTGTCGCGCCACTGCAGTTGCCGCTAAGTATTTAAACCTTGATTGTTTTCTCATCCTTCGCACTTCTGACCTCCTCGTCGACCAAGATCCAGGACTTGCTGGCAATCTTCTTATTGACCGTTTGGTTGGAGCTCACGTTCAACTTATATCCAAACAAGAATATGCCAAAATTGGCAGCGTGACACTCACCAATGTCCTTAAAGATAAGTTGATCAAGGAAGGGAGGAGGCCATATGTTATACCCGTTGGCGGATCAAACTCTTTAGGAACATGGGGTTATATTGAAGCAGTTCGGGAAATTGAGCAGCAGATTCAGAGGGGGACAGGCAATGTCATGTTTGATGATGTTGTTGTCGCTTGTGGCAGGTTCTTCTCTACTTCATCAGTCACCATCTTCTTCCCCTTTATTTTAACAACTTTCTGCCATTTTCTCTATGCCAAGGGTCTTGGCTATGCAATGAATACATCCGAGGAGCTTAATTTTGTAAAAGAAGTTGCTGCAGCTACTGGTGTTGTTCTTGACCCAGTATACAGTGGTAAGGCTGCTTATGCAATGCTGAAAGATATGCTTGACAATCCAAAGAAGTGGGAAGGGAGAAAGATCCTCTTCATACATACGGGTGGCCTCCTAGGATTGTATGACAAGGTCGATCAGTTGGCTTCTTTTGTTGGGAATTGGCAGCGAATGGATGTCAATGAATCTGTTCCTAGGCAGGATGGTATTGGAAAGATGTTCTAG 3510 0.4222 MAKRSDFAQKLLDDLRLRKERMASSHTHSSMSNQSHHLPIDAYAYTKQTYRGSRNTKATEIVSSRTGEMLNSSSRSHRSVNNGQIFNQMVSYGKGQSSRQTGDMSLALAFAFENGGRLRRNDSIMGFLHQIKRGTLEFSTSTSNYPMQINEISKGAQKLNQILRACSNGLNMDSYSIQFAKELLQGAVDLEESLRMLVDLQNNSQKKNRITLLEEDNDDNDNDNGNDTDTGMEMQLARPTFSFDENIQQLGKAIFMQRPITLTSSKEGRNSNMKRQVSQKRSTKTTSTCEGKNQTEKGRIPNVIAKLMGLDILPVPDKVEKEPMMREGSTKKTELKSKKEKNQKVIEAFKVPVRNGKPLWRDLDGIKELKEFDKPNIKIDKPAKSSPQKNLNRLNREQEGTVKGRTNDPILNNMLSQLEQVHERSQVKSSIQEINGNTLQPEKRHTNKHVMNNEKKPRNNVGVQKSYVSSKNGPHEDEEKHHRREQQLQLLTRPQGGSEMTSKNSLKSPHQLINTQKKQLSMNQVTLFKKNSGEKNVASMKSEGFLTNHYNLVRDEASNDTYDKVREIIRRKSDQISSPRDQEFERAKRSGIKTLVDEKHFNKLANKKIKNTRQQKVDMPGRNGAKLITKQGKQKIPIPDKFKVLNEAEHERVSMLRETDARIINSNEPVSVAVRHQPHKEAELSPILSSSVGGELQSQQELVAIVPNDLHCQDVQDQAVPVAAGEGFVTGEVALHKTNGEQLNKDMEKLKKSCQADHVEDYLPKMLEHDVYDRDPDLNCMWDLGWNDETVAFIEKYDVIRDTEKHILSVLLDEITVDFCSMKGMALTSSLEFLTKKPYSPPSWASHLHPLPSHVFSLAHLPTPIHRWNIPNLPNNTELWIKRDDLSGMQLSGNKVRKLEFLMADAIAQGADSIITIGGIQSNHCRATAVAAKYLNLDCFLILRTSDLLVDQDPGLAGNLLIDRLVGAHVQLISKQEYAKIGSVTLTNVLKDKLIKEGRRPYVIPVGGSNSLGTWGYIEAVREIEQQIQRGTGNVMFDDVVVACGRFFSTSSVTIFFPFILTTFCHFLYAKGLGYAMNTSEELNFVKEVAAATGVVLDPVYSGKAAYAMLKDMLDNPKKWEGRKILFIHTGGLLGLYDKVDQLASFVGNWQRMDVNESVPRQDGIGKMF 1169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2670 1169 MobiDBLite consensus disorder prediction 378 409 - -
Aed5g2670 1169 Gene3D - 894 1006 IPR036052 -
Aed5g2670 1169 PANTHER EXPRESSED PROTEIN 742 820 - -
Aed5g2670 1169 MobiDBLite consensus disorder prediction 490 509 - -
Aed5g2670 1169 Pfam DUF761-associated sequence motif 299 314 IPR032795 -
Aed5g2670 1169 PANTHER OS01G0228800 PROTEIN-RELATED 742 820 - -
Aed5g2670 1169 Pfam Pyridoxal-phosphate dependent enzyme 858 1045 IPR001926 -
Aed5g2670 1169 PANTHER OS01G0228800 PROTEIN-RELATED 1 728 - -
Aed5g2670 1169 Gene3D - 1062 1147 IPR036052 -
Aed5g2670 1169 MobiDBLite consensus disorder prediction 209 231 - -
Aed5g2670 1169 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 856 1137 IPR036052 -
Aed5g2670 1169 MobiDBLite consensus disorder prediction 433 484 - -
Aed5g2670 1169 PANTHER EXPRESSED PROTEIN 1 728 - -
Aed5g2670 1169 MobiDBLite consensus disorder prediction 265 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2670 Aed-Chr5 27211992 27220472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2670 742 822 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 50.588 1.58e-18 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2670 K05396 - gmx:102668494 1056.59