Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2659 ATGGACCGCTCCAAACTCCAAAGTTTGCCGTCTGATGATTTAATGTGTTTCACTTGTCTTTCCCAACCTTCCTTTTGTCCCTATTTAATTATATATAGCATTAATTTAGAGCTCAACTTTAGCGCTTTAAGTTTAATCAAAGAAGTTGAGTACGTACTAGTGCAATTAATGGCAGAAAGGAGTGGTAGAAATAAAAGTCTAGAGACACTAATGGACGACGGAAGAAATAATAATACCGTGAAGGATCAAGCAGCAGGGTATGGGCTTGAATTCAGTAACCTGTCGTATAGTATCATAAAGAAGCAGAAAAAGGATGGAGTTTGGATCAATAAACAAACATATCTTCTTCATGATATCTCTGGCCAGGCTATCCAAGGTCAAATTATGGCAATCATGGGACCTAGCGGTGCTGGCAAATCCACCTTTCTTGATGCATTGGCCGGCCGAATTGCTAAAGGGAGTCTTCAAGGATCTGTTAGAATTGATGCAAAACCAGTTACTACAAGCTACATGAAAAAGGTGTCATCCTACGTGATGCAAGATGACCAGCTATTCCCTATGTTGACTGTTTTTGAAACATTCATGTTTGCAGCTGAAGTTAGGCTTCCTCCTTCCATTTCCAGGGCTGAAAAGAACAAGAGGGTTTATGAACTCCTTGACCAACTAGGCTTACAGAGTGCTACACATACCTATATTGGTGATGAAGGAAGGAGAGGAGTGTCTGGAGGGGAACGACGAAGGGTATCTATTGGCATTGACATCATCCATAAGCCATCACTTCTGTTTCTCGACGAACCTACCTCAGGCCTTGATTCTACCAGTGCTTACAGTGTTGTAGAAAAGGTTAAAGACATTGCTCGAGGAGGAAGCATTGTCCTTATGACCATACACCAGCCTTCTTTTAGAATTCAAATGCTCCTCGACCAGATCACAGTCCTTGCAAGGGGAAGGCTGATATACATGGGAAAGGCAGATGCAGTTCAGGCTCACTTGTCGAGATTTGGAAGGCCTGTGCCTGATGGAGAAAACAGTATTGAGTATCTCCTTGATGTTATTGGTGAATACGATCAAGCCACGGTTGGGCTTGATCCCCTTGTCCAATTCCAACGTCATGGCCTTAAACCTGATCCTGCAGCCATGACCCCTGTTCCAAGGAACACCCCTGCCCGTGGCCCTGCTTCTGCTTCTAAACACATGATTATTAGCCTACGCAGCCAAGGATTTACGGCTGGAATACACCACCCTGATTCTGCACAGTTTAGTAGTTATCATGACGACGACAACGACGACGATTTTGATAACTCCCTTGGAAGGACACCAAGGAATATGACCACTAGTGGTGTTCACCCGCGTTTGGCTTCTCAGTTCTACAAAGACTTCTCCGCCAAAGATTTCTCTGTCTGGCTTTACCATGGCGTGGTAGGAACCCCGCGTCGCCAACCATCATGGACTCCAGCTAGAACTCCCAGATGGACGCCTGGGAAAACACCAACAAGTCTAGTTTCCAACTCCAACCATTATTCTAAGGATCATGCAGTGGACTACTCATATGAAGGATTTGAGATTGAGGAGGAGCAAGAAGTTGTTGATGACACATCCAACAAGTATGCAAACCCATGGTTGCGTGAGGTTGCAGTGCTCTCTTGGCGAACAGCACTGAATGTAATTCGCACCCCTGAACTGTTCCTCTCCCGTGAGATTGTGTTAACTTTTATGGCACTTATCCTCTCCAGCATTTTTCATAATCTGAGTCATCCTTCATTCAATGACATCAATAGGCTCCTCAATTTCTACATCTTTGCTGTGTGCCTTGTCTTCTTTTCTTCCAATGATGCAGTCCCATCTTTTATCATGGAGAGGTTCATCTTTATAAGGGAGACTTCCCACAATGCTTACCGTGCTTCTTCATATGTCATTTCTTCCCTCATAGTTTACCTCCCATTTTTTGCTGTTCAGGGCTTCACATTTGCTTTCATAACCAAAAAGATGCTCCACTTGAAAAGCAGTCTCTTTTATTTCTGGCTAATACTTTATGCCTCGCTTATTACTACCAATGCATATGTTATGCTTGTTAGTGCACTTGTGCCTAGTTACATCACAGGTTATGCAGTAGTCATAGCCACAACAGCACTCTTCTTCTTGACCTGTGGTTTCTTCCTCAAACGAACTCAGATACCCATTTACTGGAGGTGGCTCCACTATATTTCTGCAATCAAATATCCATTTGAGGCATTGCTCACAAATGAATTCAATAACCTAAAATGCTACACAGGAACCCTATCAGAATTATCCCCTGGACCATTAGGTGACCTCAAGCTCAGCAAATACCATAACTCCACTCTGCCCCCTAACTGCTTATTAGGGAAAGATATCTTGTCCTCCATGGATATTTCTATGGAAAACATATGGTATGACATCTTAATCCTCCTAGCTTGGGGTGTTCTCTACAGGTTCTTCTTCTACTTGGTTTTGAGATTTTACTCAAAGAATGAGAGGAAATGA 2502 0.4321 MDRSKLQSLPSDDLMCFTCLSQPSFCPYLIIYSINLELNFSALSLIKEVEYVLVQLMAERSGRNKSLETLMDDGRNNNTVKDQAAGYGLEFSNLSYSIIKKQKKDGVWINKQTYLLHDISGQAIQGQIMAIMGPSGAGKSTFLDALAGRIAKGSLQGSVRIDAKPVTTSYMKKVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRAEKNKRVYELLDQLGLQSATHTYIGDEGRRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSFRIQMLLDQITVLARGRLIYMGKADAVQAHLSRFGRPVPDGENSIEYLLDVIGEYDQATVGLDPLVQFQRHGLKPDPAAMTPVPRNTPARGPASASKHMIISLRSQGFTAGIHHPDSAQFSSYHDDDNDDDFDNSLGRTPRNMTTSGVHPRLASQFYKDFSAKDFSVWLYHGVVGTPRRQPSWTPARTPRWTPGKTPTSLVSNSNHYSKDHAVDYSYEGFEIEEEQEVVDDTSNKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLTFMALILSSIFHNLSHPSFNDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGFTFAFITKKMLHLKSSLFYFWLILYASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPIYWRWLHYISAIKYPFEALLTNEFNNLKCYTGTLSELSPGPLGDLKLSKYHNSTLPPNCLLGKDILSSMDISMENIWYDILILLAWGVLYRFFFYLVLRFYSKNERK 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2659 833 SMART AAA_5 125 325 IPR003593 -
Aed5g2659 833 Pfam ABC transporter 116 268 IPR003439 GO:0005524
Aed5g2659 833 ProSitePatterns ABC transporters family signature. 240 254 IPR017871 GO:0005524
Aed5g2659 833 CDD ABCG_EPDR 89 322 - -
Aed5g2659 833 MobiDBLite consensus disorder prediction 479 503 - -
Aed5g2659 833 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 332 IPR027417 -
Aed5g2659 833 MobiDBLite consensus disorder prediction 419 436 - -
Aed5g2659 833 MobiDBLite consensus disorder prediction 376 396 - -
Aed5g2659 833 Gene3D - 88 334 IPR027417 -
Aed5g2659 833 MobiDBLite consensus disorder prediction 414 446 - -
Aed5g2659 833 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 89 340 IPR003439 GO:0005524
Aed5g2659 833 PANTHER ABC TRANSPORTER 58 827 - -
Aed5g2659 833 MobiDBLite consensus disorder prediction 481 503 - -
Aed5g2659 833 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 58 827 - -
Aed5g2659 833 Pfam ABC-2 type transporter 544 750 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2659 Aed-Chr5 27140921 27143659 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2659 126 325 Calmodulin-binding Proteins AT2G36910 26.066 5.01e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2659 K05681 - gmx:100819497 1285.4