Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2655 ATGTCTTCTTCTTCTCTGTTGTTGGAGGTGGATGGAAACGGTAGTGATAAAGAAGCGAAAATCCAGATAAGGAATCTTAGTCGAGTTTCGGAGGATGGGTACACCATCCTGAAAGACATAAACCTTGAGATCCCAGAGGGTGTGATCATGGGAGTGATAGGACCAAGTGGGAGTGGGAAGTCAACGCTCTTAAGGGCACTTAACCGGCTCTGGGAGCCACCCTCCGGCACCGTCTTCCTGGACGGGAAAGACATCTCCCATCTCGATGTCGACGTCCTCTCTCTTCGGCGTAACGTTGGCATGCTCTTTCAGCTCCCTGCTCTTTTTCCAGGAAGCGTCGCCGACAATGTCAGGTATGGACCACGTCTTCGAGGAATACAGCTAAGCGATGATGAGGTCCGCAAGTTGCTTCTAATGGCCGACTTGGATGTTTCTTTCATGGATAAGTCAGGGGCTGAACTCTCTGTTGGACAAGCTCAAAGAGTTGCACTTGCTAGGACATTAGCTAATTCACCACAGGTATTGTTGCTTGATGAGCCCACTAGTGCTTTAGATCCAATATCCACACAAAACATAGAGGATGCCCTTGTCAAGCTCAACAAGAATCGGGGCATGACTGTCATTATCGTCTCTCACAGCATCAAACAGATCCAGAGGATCGCTCACATAGTCTGCCTGCTTGTTGATGGCCAAATTGTTCAAGTGCTCAACCCTCATCAACTCGATCAGCCCAACAACCATCCCATGGCACAGAGGTTTCTTCAACTCACTTCTTAA 777 0.4865 MSSSSLLLEVDGNGSDKEAKIQIRNLSRVSEDGYTILKDINLEIPEGVIMGVIGPSGSGKSTLLRALNRLWEPPSGTVFLDGKDISHLDVDVLSLRRNVGMLFQLPALFPGSVADNVRYGPRLRGIQLSDDEVRKLLLMADLDVSFMDKSGAELSVGQAQRVALARTLANSPQVLLLDEPTSALDPISTQNIEDALVKLNKNRGMTVIIVSHSIKQIQRIAHIVCLLVDGQIVQVLNPHQLDQPNNHPMAQRFLQLTS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2655 258 CDD ABC_PstB_phosphate_transporter 21 241 IPR005670 GO:0005315|GO:0016020|GO:0035435
Aed5g2655 258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 243 IPR027417 -
Aed5g2655 258 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 9 258 IPR005670 GO:0005315|GO:0016020|GO:0035435
Aed5g2655 258 Gene3D - 16 256 IPR027417 -
Aed5g2655 258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 21 254 IPR003439 GO:0005524
Aed5g2655 258 ProSitePatterns ABC transporters family signature. 154 168 IPR017871 GO:0005524
Aed5g2655 258 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 9 258 - -
Aed5g2655 258 Pfam ABC transporter 37 182 IPR003439 GO:0005524
Aed5g2655 258 SMART AAA_5 46 239 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2655 Aed-Chr5 27114364 27115140 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2655 36 256 Calmodulin-binding Proteins AT2G36910 32.051 1.65e-32 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2655 K02068 - gmx:100791365 400.979