Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2652 ATGGAAGGTTTGCTGGGCCTTTTAAGGATTCACATCAAGCGCGGTGTCAACCTCGCCGTTCGTGATGTCAATACTAGCGATCCATACATCGTCGTTAAGATGGGAAAGCAGAAACTCAAGACTCGTGTGATTAAAAAGGATATTAATCCTGAATGGAACGAAGAACTTACGCTTTCTGTTACAGATCCACTTCATCCATTTACACTGACTGTGTATGACCATGACACATTCTCGAAGGATGACAAAATGGGAGATGCAGAAATTGACATATCATCATACATGGAAGCCGTAAAGATGAACTTAGAAGATCTGCCGAGTGGTACTATAATCACAAGAATACAACCATGCAGGCAAAATTGCCTGGCGGAGGAAAGTTGCATCACTTATAGCGATGGCAAAATTGTCCAAGACGCTATCCTTAGATTGCGACACGTCGAATGTGGTGAAGTTGAAATCCAATTGCAATGGATTGCTCTTCCTGGCAACCAGGGTTTATGA 498 0.4277 MEGLLGLLRIHIKRGVNLAVRDVNTSDPYIVVKMGKQKLKTRVIKKDINPEWNEELTLSVTDPLHPFTLTVYDHDTFSKDDKMGDAEIDISSYMEAVKMNLEDLPSGTIITRIQPCRQNCLAEESCITYSDGKIVQDAILRLRHVECGEVEIQLQWIALPGNQGL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2652 165 CDD C2_ArfGAP 5 148 - -
Aed5g2652 165 Pfam C2 domain 6 93 IPR000008 -
Aed5g2652 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
Aed5g2652 165 SMART C2_3c 7 102 IPR000008 -
Aed5g2652 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Aed5g2652 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 163 - -
Aed5g2652 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 5 100 IPR035892 -
Aed5g2652 165 Gene3D C2 domain 5 163 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2652 Aed-Chr5 27103211 27104384 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2652 38 165 C2H2 Transcription Factor Family AT1G70790 60.000 1.40e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2652 - - gmx:100799469 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2652 5 27103211 27104384 Aed7g0281 7 1990968 1993397 PCT