Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2649 AAAGATATCATCATCACATTCACATCATCTCCACCCACCAATACCATTGCAATTGCACTTCAACTCATTCATCCTCTTCTCTCCAGGATTAGGTGTAAGAGACGAAAAATGGTAAACTCAACATATGAAAGATTTTCAAAGGATTTTGTGATGGGAGGAGTAGCAGCAATCATATCAAAGAGTGCAGCGGCACCAATTGAGAGAGTCAAGCTTTTATTGCAAAACCAGGGTGAATTGATTAAAAGAGGACAACTCAAAAAACCATACTTGGGTGTGTCTGATGGCTTTAAGAGGGTCTTCATGGAAGAGGGTTTGATTGCCTTTTGGAGAGGTCACCAGGCCAATATTATCCGATATTTCCCCACACAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAAGCATTTTTGGGTATTCCAAAGAGAGAGACGGGTACATTAAGTGGTTTGCTGGGAATGTGGCTTCAGGCAGTGCTGCAGGAGCGACTACTTCATTACTTCTGTATCATTTAGATTATGCACGTACTAGATTGGGCACCGATGCAATAGAGTGCCGGGTTACTGGTCAACGCCAGTTTAAAGGACTAATTGATGTATACCAGAAGACCTTATCAAGTGATGGAATTGCTGGCTTGTACAGGGGATTTGGGATTTCAATATGGGGAATCACCTTGTATCGAGGGATGTACTTTGGGATCTATGACACCATGAAGCCTATTGTTTTAGTTGGGCCTTTTGAGGGGAAGTTTCTTGCTAGTTTCTTCTTAGGTTGGAGCATCACAACATTTTCAGGGGTTTGTGCATACCCTTTTGACACATTGCGCCGGAGAATGATGCTTACCTCTGGACATCCAAACAAGTACTGTACTGCAATACATGCATTTCAAGAGATTGTTCAACTGGAGGGTTTCCGAGCTCTATTTCGAGGAGTTACCGCAAATATGCTTCTTGGCATGGCAGGAGCTGGGGTGCTTGCTGGATACGATCAGCTGAACCGTGTCTCATCCAAGACACAGTCACTAAAATGA 1029 0.4295 KDIIITFTSSPPTNTIAIALQLIHPLLSRIRCKRRKMVNSTYERFSKDFVMGGVAAIISKSAAAPIERVKLLLQNQGELIKRGQLKKPYLGVSDGFKRVFMEEGLIAFWRGHQANIIRYFPTQAFNFAFKGYFKSIFGYSKERDGYIKWFAGNVASGSAAGATTSLLLYHLDYARTRLGTDAIECRVTGQRQFKGLIDVYQKTLSSDGIAGLYRGFGISIWGITLYRGMYFGIYDTMKPIVLVGPFEGKFLASFFLGWSITTFSGVCAYPFDTLRRRMMLTSGHPNKYCTAIHAFQEIVQLEGFRALFRGVTANMLLGMAGAGVLAGYDQLNRVSSKTQSLK 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2649 342 Gene3D Mitochondrial carrier domain 46 339 IPR023395 -
Aed5g2649 342 Pfam Mitochondrial carrier protein 149 240 IPR018108 -
Aed5g2649 342 Pfam Mitochondrial carrier protein 45 138 IPR018108 -
Aed5g2649 342 Pfam Mitochondrial carrier protein 249 336 IPR018108 -
Aed5g2649 342 PRINTS Mitochondrial carrier protein signature 61 75 IPR002067 GO:0055085
Aed5g2649 342 PRINTS Mitochondrial carrier protein signature 111 131 IPR002067 GO:0055085
Aed5g2649 342 PRINTS Mitochondrial carrier protein signature 48 61 IPR002067 GO:0055085
Aed5g2649 342 PRINTS Mitochondrial carrier protein signature 213 231 IPR002067 GO:0055085
Aed5g2649 342 PRINTS Mitochondrial carrier protein signature 257 279 IPR002067 GO:0055085
Aed5g2649 342 PRINTS Mitochondrial carrier protein signature 163 181 IPR002067 GO:0055085
Aed5g2649 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 148 240 IPR018108 -
Aed5g2649 342 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 40 339 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aed5g2649 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 43 136 IPR018108 -
Aed5g2649 342 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 40 339 - -
Aed5g2649 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 334 IPR018108 -
Aed5g2649 342 PRINTS Adenine nucleotide translocator signature 89 110 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aed5g2649 342 PRINTS Adenine nucleotide translocator signature 122 134 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aed5g2649 342 PRINTS Adenine nucleotide translocator signature 45 57 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aed5g2649 342 PRINTS Adenine nucleotide translocator signature 148 161 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aed5g2649 342 PRINTS Adenine nucleotide translocator signature 253 269 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Aed5g2649 342 SUPERFAMILY Mitochondrial carrier 44 331 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2649 Aed-Chr5 27090525 27093956 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2649 43 337 Antiporters AT5G17400 77.288 1.66e-164 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2649 K05863 - gmx:100798418 562.377