Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2641 ATGAAGAACATTCTTAAGAAGCTTCATATCATGTCCAATCCATCAGAAGATGCCCAAGGGGCTACTTCATCAAAGAGCAACAAGTCCAGTGACGGTTCATCTTCATCCACTGCCCCTAAGAAGCTTTCCAATTGGTTGAATTCAGTTTCCAATAGGCAGAGTCCCAGTCCTCCATCTCCCAACCTGGCTAGAGGAGAAAGAATGGAGGCATCTGATTCAGTGAGCAGTGGTGGTTTGGATGTTGTGTCTGATTCAGCTAGGCGTGATTCGGAGTCTAGCACGTCAAGGGATCCTGAAGTGGAAGAGGAGTATCAGATACAACTGGCTTTGGAGCTGAGTGCAAAAGAGGACCCTGAAGCTGTACAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGATAATACACCAGCTGAAGTTGTGGCCTACCGTTACTGGAATTACAATGCTCTTGGTTATGATGACAAAATCTCAGATGGTTTCTATGATCTGTATGGGATCTTGACCGAGTCAACCTCTGCAAGAATGCCCTCTCTTGTAGATCTGCAAGGAACACCAACCTCAGATGATGTGACATGGGAAGCAGTCTTGGTCAATAGGGCTGCTGATTCCAATTTGTTGAAACTTGAGCAAAAAGCCATGGAGATGGCTTTCAATTCAAGAAAAGATTTTGAAGATAGTAATTTGGTACACAAGCTTGCAATAATAGTGGCTGACTGTATGGGTGGGTCAGTTGAAGATCCTGAAAGCATGTCAAGAGCATGGAGGAGTCTTAGTTACAGTCTAAAAGCAACACTTGGTAGCATGGTTTTGCCACTTGGTTCACTCACCATTGGATTGGCTCGTCATCGTGCATTGTTATTCAAGGTTTTGGCTGACAGTTTGGGCATCCCATGTCGATTGGTGAAAGGACTGCAGTATATGGGTTCCAATGATGTGGCGATGAACTTTGTCAAGATTGGTGATGGAAGGGAGTACATTGTTGACCTAATGGCAGCTCCTGGAACACTTATTCCTTCGGATGCTACTGGATCACTCATTGAGTGTGACGAATCTTCCTATGTAGCCAGTCCTTCATCAAGAGAGCTTGATTCGTCTCATGTAGCATCGTTCAGCAGTGGGGTCGGAAGTTCATCTGAAGAAGCTTCAGACTCTGGGACTCTGGATAAAGATAATAGTAATAAATTAAAGCATTTTGGCTATGCAGGCAAGGAAGAATTGAAGAAACCATCAAATGAATCCAAAAATACCACTCCCTATGAGGAGAAGATCATACCTAGCAGACCTAATTATCCATATATGCATGGAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCAGTGCGTAGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATGCTGCTAAGGAGAATCCTAACTTGGCTCAAAAACTTCATGATGTTTTGCTTGAAAGTGGTGTTGTTGCACCTCCAAACTTATTTTCTGAAATTTATCACGGGCAGTTTGGTACCCCAACTGAGGCCAATTATCCAACTGAACAAATAGATGAAAATAAACGAGGAAGTGTGCAGCAGCGAGAAACTAAGTCTGATGACAATCCAGTTCCTGCTCTATTTTTGCCTCCTTTGCCTCACCACCGAGTTCATCACAAAGCAATTCCTAGCACTAGCAGTCAGCTGGAGCATTCTAAGCCTGTCGATGCCTTAGGAATTGCCCTTCATCTTGATACAGAGGAAGCTGCTGGACAGCACACATCATCTCAGGTAGAAGCAGCTCAGGTCAAGTATGGGAAAAATGTCCCAGTTGCAGCAGCTGCAGCTGCTGCTGCTGCTGTTGTTGCATCTACTATGGTAGTTGCTGTAACAAAGTCAAACGCTGACTCGAATCTTGAGATTCCTGTAGCAGCAGCTGCTACTGCAGCTGTTGTAGCAACCACTGCTGCTGTCAGTAAGCAGTATGAGCAGGGCAGTCGAAGTGATGGGGATACCGAGGGTGCTGGTTATGAGCATAATGCTTTAGGAGAAAACTCAGAAGGCGAGAGAAAGTCTGATAGATCAGTAAGTAATGACAGCACAAAATCTGATTCTGCACTAGATGATGTTGCTGAGTATGACATTCCATGGGAGGAAATAGCGGTGGGAGAGCGTATTGGACTTGGATCATATGGGGAAGTTTACCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAAAAGTTACTACATCAAGATATCTCCGGTGAATTACTTGAAGAATTCAAAAGTGAGGTCCAAATTATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTATAACTCGACCTCCAAATCTTTCAATTGTTTCTGAATTTCTTCCTAGAGGGAGTTTGTATAGATTAATTCACCGACCTAACAATCAATTAGATGAGCGAAGGCGGTTGCGGATGGCCCTTGATGCTGTAGGGATTTTGTTGTCTTTAATTGCAATGCAGCTTGATTCCGCAAATTATTTCTGTAATGACCAGTGGTTCTCACGATATAACGTGTCTCTTTTGACTATTCAGGCTCGAGGAATGAACTATCTGCACAACAGCACTCCAGTGATAGTGCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGACAAAAACTGGGTTGTAAAGGTATGTGATTTTGGCTTATCACGAATGAAGCATAGTACATTCCTTTCTTCCAGATCAACTGCGGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGACGTTTTTAGCTATGGAGTCATATTATGGGAGCTCTCTACTTTGCAGCAACCCTGGGGAGGAATGAATCCGATGCAAGTAGTTGGTGCTGTGGGTTTCCAACATCGTCGTCTTGACATTCCAGATAATGTAGACCCTGCCATTGCAGATATTATCAGACAATGCTGGCAGACAGATCCAAAGTTGAGGCCAACATTTACTGAAATCATGGCTGCTCTGAAGCCATTGCAGAAGCCAATTACTGCTTCTCAAATGCATAGACTAAGTGCTCAGTCATCACGAGTTGCTGAAGACCCTGCAGGATAG 3084 0.4384 MKNILKKLHIMSNPSEDAQGATSSKSNKSSDGSSSSTAPKKLSNWLNSVSNRQSPSPPSPNLARGERMEASDSVSSGGLDVVSDSARRDSESSTSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGILTESTSARMPSLVDLQGTPTSDDVTWEAVLVNRAADSNLLKLEQKAMEMAFNSRKDFEDSNLVHKLAIIVADCMGGSVEDPESMSRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGLQYMGSNDVAMNFVKIGDGREYIVDLMAAPGTLIPSDATGSLIECDESSYVASPSSRELDSSHVASFSSGVGSSSEEASDSGTLDKDNSNKLKHFGYAGKEELKKPSNESKNTTPYEEKIIPSRPNYPYMHGRSPSWTEGISSPAVRRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHGQFGTPTEANYPTEQIDENKRGSVQQRETKSDDNPVPALFLPPLPHHRVHHKAIPSTSSQLEHSKPVDALGIALHLDTEEAAGQHTSSQVEAAQVKYGKNVPVAAAAAAAAAVVASTMVVAVTKSNADSNLEIPVAAAATAAVVATTAAVSKQYEQGSRSDGDTEGAGYEHNALGENSEGERKSDRSVSNDSTKSDSALDDVAEYDIPWEEIAVGERIGLGSYGEVYRGEWHGTEVAVKKLLHQDISGELLEEFKSEVQIMKRLRHPNVVLFMGAITRPPNLSIVSEFLPRGSLYRLIHRPNNQLDERRRLRMALDAVGILLSLIAMQLDSANYFCNDQWFSRYNVSLLTIQARGMNYLHNSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDNVDPAIADIIRQCWQTDPKLRPTFTEIMAALKPLQKPITASQMHRLSAQSSRVAEDPAG 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2641 1027 SUPERFAMILY Protein kinase-like (PK-like) 696 997 IPR011009 -
Aed5g2641 1027 MobiDBLite consensus disorder prediction 15 60 - -
Aed5g2641 1027 MobiDBLite consensus disorder prediction 1 102 - -
Aed5g2641 1027 MobiDBLite consensus disorder prediction 387 419 - -
Aed5g2641 1027 ProSitePatterns Protein kinases ATP-binding region signature. 718 740 IPR017441 GO:0005524
Aed5g2641 1027 MobiDBLite consensus disorder prediction 675 690 - -
Aed5g2641 1027 Gene3D Transferase(Phosphotransferase) domain 1 790 1024 - -
Aed5g2641 1027 Pfam Protein tyrosine and serine/threonine kinase 713 999 IPR001245 GO:0004672|GO:0006468
Aed5g2641 1027 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 834 1017 - -
Aed5g2641 1027 MobiDBLite consensus disorder prediction 370 386 - -
Aed5g2641 1027 Pfam Ethylene-responsive protein kinase Le-CTR1 141 341 - -
Aed5g2641 1027 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 817 - -
Aed5g2641 1027 ProSiteProfiles Protein kinase domain profile. 712 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2641 1027 Gene3D Phosphorylase Kinase; domain 1 705 789 - -
Aed5g2641 1027 MobiDBLite consensus disorder prediction 653 699 - -
Aed5g2641 1027 MobiDBLite consensus disorder prediction 505 536 - -
Aed5g2641 1027 MobiDBLite consensus disorder prediction 370 434 - -
Aed5g2641 1027 ProSitePatterns Serine/Threonine protein kinases active-site signature. 866 878 IPR008271 GO:0004672|GO:0006468
Aed5g2641 1027 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 834 1017 - -
Aed5g2641 1027 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 817 - -
Aed5g2641 1027 CDD STKc_MAP3K-like 718 999 - -
Aed5g2641 1027 SMART serkin_6 712 1002 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2641 1027 MobiDBLite consensus disorder prediction 84 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2641 Aed-Chr5 27025728 27034915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2641 1 1013 MAP Kinase Kinase Kinase AT1G73660 59.771 0.0 1106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Aed5g2641 PK_Tyr_Ser-Thr 1.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2641 - - gmx:100778331 1681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2641 5 27025728 27034915 Aed5g2641 5 27025728 27034915 ECH
Aed5g2641 5 27025728 27034915 Aed7g0273 7 1942446 1953182 PCT