Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2639 ATGGGTGGTGGAGGAACACTCGTGGAAGGGATTCGACGCTTTTTTCAACGACGCGCTTCTGCTTCTACTTCTACTTCTGCTTCTGCTTCCGCTGACCACAACCACAACCACAATGCCAATAATAGCCACGTCTCAGTGAGAGATTTGCGCTCGCAATTGGCTTCCATTCCCAAACAGGACCCCGATTCTGATTTCGATTTCGATTTCTCTACCTTGAAGCCCATCAAAGTTCCCACACAAATCCCCTTCAGACCCTCCTCTTCCATGGATCATCACAAAAAGGGTGCCCCGGAGACACAGTTTTTTACCGAGTATGGAGAGGCAAGTCAATATGAGATCCAAGAGGTTGTTGGAAAAGGAAGTTACGGTGTTGTGGGTTCTGCCATTGATACCCACACAGGTGAAAAGGTTGCAATCAAGAAAATTAATGATGTTTTTGAGCATGTATCGGATGCCACGCGGATCCTTAGAGAAATTAAGCTCTTGCGGTTGCTTAGACATCCTGATATCGTGCAAATTAAGCATATTATGCTTCCTCCTTCGCGGAGAGAGTTCAGGGATATCTATGTTGTGTTTGAGTTGATGGAATCCGACCTTCATCAAGTAATCAAGGCAAATGATGATCTTACTCCTGAGCACCATCAATTTTTCTTGTACCAACTTCTCAGGGGACTGAAATATATACATACAGCAAACGTGTTTCATCGTGATTTGAAGCCAAAAAATATTCTTGCTAACGCCGATTGCAAACTAAAAATATGCGATTTTGGGCTTGCTCGGGTTTCATTTAACGAGGCTCCATCAGCTATATTCTGGACTGATTATGTTGCAACTCGGTGGTACCGTGCTCCTGAATTATGCGGTTCTTTTTTCTCAAAATACACCCCTGCAATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCACTGGGAAGCCATTGTTTCCTGGGAAAAATGTTGTGCACCAATTGGATATCATGACTGATTTGCTTGGCACTCCTCCTCCTGAGTCCATCGCAAGGGCATTATCTGATCCTTACTTCACTGGTTTGGCAAACATGGAGCGCGAACCATCCACTCAACCAATTTCAAAACTTGAGTTTGAATTTGAGAGAAGGAAATTGACCAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTTTGGAGTATCATCCCCAAATGCTCCAGGAATATCTTCGTGGTGGAGATCAAACTAGCTTCATGTATCCAAGTGGGGTCGATCGGTTCAAGCGACAGTTTGCACATCTAGAAGAGCATTATGGCAATGGTGAACGGAGCACTCCACCATTGCAGAGACAGCATGCCTCTTTACCTAGGCAAGTAGAACGAGTTTGTGCTCCCAAGGATGAAAGTAAACAAAATAATGATTCTGGAATGCCGAGTGGATCAAATCTTCAGCAGAGTCCTCCAGATTCTGATGAGATAGCAGGTGCTCAAAATGGAATCTCCAAACCAAACTGCAGTGCACGTAGCTTGTTGAAGAGTGCCAGTATTAGTGCTTCCAAGTGTGTAGTTGTGAAACAAAAGAAAGATCCAGAGCAAGAGCCAATTACGGAAGTAAATGACGAGGCAGTGGATGGAGTGACAGATGAGATTGCTGCCCTCCATGCCTGA 1644 0.441 MGGGGTLVEGIRRFFQRRASASTSTSASASADHNHNHNANNSHVSVRDLRSQLASIPKQDPDSDFDFDFSTLKPIKVPTQIPFRPSSSMDHHKKGAPETQFFTEYGEASQYEIQEVVGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVQIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDIMTDLLGTPPPESIARALSDPYFTGLANMEREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGNGERSTPPLQRQHASLPRQVERVCAPKDESKQNNDSGMPSGSNLQQSPPDSDEIAGAQNGISKPNCSARSLLKSASISASKCVVVKQKKDPEQEPITEVNDEAVDGVTDEIAALHA 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2639 547 SUPERFAMILY Protein kinase-like (PK-like) 106 362 IPR011009 -
Aed5g2639 547 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 72 343 - -
Aed5g2639 547 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 344 486 - -
Aed5g2639 547 Pfam Protein kinase domain 111 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2639 547 MobiDBLite consensus disorder prediction 461 496 - -
Aed5g2639 547 MobiDBLite consensus disorder prediction 19 49 - -
Aed5g2639 547 ProSiteProfiles Protein kinase domain profile. 111 397 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2639 547 MobiDBLite consensus disorder prediction 430 449 - -
Aed5g2639 547 SMART serkin_6 111 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2639 547 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 72 343 - -
Aed5g2639 547 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 344 486 - -
Aed5g2639 547 Gene3D Phosphorylase Kinase; domain 1 374 396 - -
Aed5g2639 547 MobiDBLite consensus disorder prediction 19 62 - -
Aed5g2639 547 ProSitePatterns MAP kinase signature. 146 249 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aed5g2639 547 Gene3D Phosphorylase Kinase; domain 1 109 194 - -
Aed5g2639 547 MobiDBLite consensus disorder prediction 455 496 - -
Aed5g2639 547 Gene3D Transferase(Phosphotransferase) domain 1 195 341 - -
Aed5g2639 547 ProSitePatterns Protein kinases ATP-binding region signature. 117 141 IPR017441 GO:0005524
Aed5g2639 547 Gene3D Transferase(Phosphotransferase) domain 1 342 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2639 Aed-Chr5 27004119 27009337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2639 96 547 MAP Kinase Gene Family AT3G18040 72.495 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aed5g2639 Pkinase 4.6e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2639 - - gmx:100780831 899.042
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2639 5 27004119 27009337 Aed5g2639 5 27004119 27009337 ECH