Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2614 ATGGGGAAGAAGAAGAAGAGAGTTTCTTCGAAGGTTTGGTGTTATTACTGCGATCGCGAATTCGACGACGAGAAGATCTTGGTGCAGCACCAGAAAGCCAAGCACTTCAAATGCCATGTCTGCCACAAGAAGCTCTCCACCGCTGGCGGCATGGCCATCCACGTTCTCCAGGTCCACAAGGAATCCGTCACCAAGGTGCCCAATGCTAAACCCGGCAGAGAGAGTACGGATATTGAAATATATGGAATGCAAGGGATTCCACCAGATATCTTGGCTGCTCATTATGGTGAAGAAGAGGATGATGTTCCATCAAAGGCAGCCAAGGTGGATATTCCACCAACTCAGCTTGTAGGTGGAATGATGCCACCTTCTTTGGGTGCCGGATATCCTCCACGACCAACCTTGCCAACAATTTATAATCCAGCTGTACCTTTGCCTCCAAATGCTTGGGTGGTTCCACCTCGGCCTCAACCATGGTTTTCACAGCCTCCAGCTGTTTCAGTTCCTTCTTCTGCCCCATACACACAGCAGCCACTATTTCCTGTGCAGAATGTGAGGCCTCCACTGCCAGCAACTGCTCCTGCGTTCCAAACTCAGATTACTCCTCCTGGATTGCCTACATCTGCACCTGTCCCAGTTTCTCAACCTTTATTTCCTGTTGTTGGAAATAATCATACAACTACTCAAAGTTCAACATTTTCTGCTCCACCTCTGCCCTCAAGTGTTCCATCAGTTACCCCAGTGATGTCTACAAATGTCCCTGTTGATACACATTTGAGTTCCAACTCTTCAGTAACAAGTAGTTATCAGGCTATAGGGGTTCCAGGTGGAGTAGCAAGTAACTCACATTCTTATGCTTCTGGTCCAAATACTGGTGGTCCTTCAATTGGGCCTCCCCCTGTAATTGCAAACAAAGCTCCTGCTTCTCAGCCTGCCACCAACGAAGTCTACTTAGTTTGGGATGATGAGGCAATGTCCATGGAGGAAAGAAGAATGTCTTTGCCAAAATATCAGGTGCATGATGAAAGTAGCCAGATGAGCTCCATTGATGCAGCCATAGATAAGAGGATACTTGAGAGCAGGCTAGCTGGTCGTATGGCATTTTAG 1107 0.4761 MGKKKKRVSSKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMAIHVLQVHKESVTKVPNAKPGRESTDIEIYGMQGIPPDILAAHYGEEEDDVPSKAAKVDIPPTQLVGGMMPPSLGAGYPPRPTLPTIYNPAVPLPPNAWVVPPRPQPWFSQPPAVSVPSSAPYTQQPLFPVQNVRPPLPATAPAFQTQITPPGLPTSAPVPVSQPLFPVVGNNHTTTQSSTFSAPPLPSSVPSVTPVMSTNVPVDTHLSSNSSVTSSYQAIGVPGGVASNSHSYASGPNTGGPSIGPPPVIANKAPASQPATNEVYLVWDDEAMSMEERRMSLPKYQVHDESSQMSSIDAAIDKRILESRLAGRMAF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2614 368 SMART c2h2final6 12 35 IPR013087 -
Aed5g2614 368 SMART c2h2final6 36 59 IPR013087 -
Aed5g2614 368 Gene3D Classic Zinc Finger 1 66 - -
Aed5g2614 368 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Aed5g2614 368 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Aed5g2614 368 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Aed5g2614 368 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 368 - -
Aed5g2614 368 PANTHER ZINC FINGER PROTEIN 207 1 368 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2614 1 348 C2H2 Transcription Factor Family AT1G30970 63.187 4.39e-139 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed5g2614 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2614 - - gmx:100819009 681.404