Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed5g2551 | ATGTCTTCTTCAAAGAGTGTCAGCAGTAGTTCTAGTGAAGATGACATTAATGAACTTAGAAGAGGGCCTTGGACTCTTGAAGAGGATAATTTGCTCTCCCAATACATTTCTAATCATGGGGAAGGCCGATGGAATTTGCTGGCTAAACGTTCAGGATTGAAGAGAACTGGGAAAAGTTGCAGATTAAGGTGGTCAAAAATTGCACAAAATTTGCCAGGAAGAACAGACAATGAAATAAAGAACTATTGGAGAACTAGGATTCAGAAACAAGCAAGACATTTGAAAATTGACACTGACAGCAGAGAGTTTCAAGAACTTGTTAGGCGTTTCTGGATGCCAAGATTGCTTCAGAAAGCCAAAGAATCATCAACATCAACATCTTCTTCAGCCATGTCAATTCAAAACCAGGCAATTCCTATGCCTCATGTTGGTGTTTCTCAGCATTCAACTGTTGGGACCATAATAGCATCACATTCACACCCCCCTTGTATGATGAATGAAGCTGGTCCCACATCGCAGAACTCAGACTCTGAACACAACACCTTGTCTGAGTCAGCAAAAGTGCCTCAGCATTTTGGACACTCCACCATCACCCAATTTCATCATGCCTTGAATAACAATGACTTTGGCACCTTCACATATGACGCTTACAATGTCTATGGGTATGGGGTGCCTGAGGATTCGCAGTACCCAATTGGTGATTATCAAATGGTAGGAGTAGGAGACAACGATTTTGCATGTAACATGTGGAACATGGATGAACTGTGCCAATTTACCAAGTTACAAAAATAA | 792 | 0.4129 | MSSSKSVSSSSSEDDINELRRGPWTLEEDNLLSQYISNHGEGRWNLLAKRSGLKRTGKSCRLRWSKIAQNLPGRTDNEIKNYWRTRIQKQARHLKIDTDSREFQELVRRFWMPRLLQKAKESSTSTSSSAMSIQNQAIPMPHVGVSQHSTVGTIIASHSHPPCMMNEAGPTSQNSDSEHNTLSESAKVPQHFGHSTITQFHHALNNNDFGTFTYDAYNVYGYGVPEDSQYPIGDYQMVGVGDNDFACNMWNMDELCQFTKLQK | 263 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed5g2551 | 263 | SUPERFAMILY | Homeodomain-like | 19 | 83 | IPR009057 | - | |
Aed5g2551 | 263 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 16 | 72 | IPR017930 | - | |
Aed5g2551 | 263 | CDD | SANT | 23 | 85 | IPR001005 | - | |
Aed5g2551 | 263 | Gene3D | - | 64 | 90 | - | - | |
Aed5g2551 | 263 | SMART | sant | 20 | 89 | IPR001005 | - | |
Aed5g2551 | 263 | Gene3D | - | 21 | 63 | - | - | |
Aed5g2551 | 263 | PANTHER | HOMEODOMAIN-LIKE PROTEIN-RELATED | 8 | 64 | - | - | |
Aed5g2551 | 263 | PANTHER | MYB TRANSCRIPTION FACTOR-RELATED-RELATED | 8 | 64 | IPR044676 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g2551 | 263 | ProSiteProfiles | Myb-like domain profile. | 16 | 68 | IPR001005 | - | |
Aed5g2551 | 263 | PANTHER | MYB TRANSCRIPTION FACTOR-RELATED-RELATED | 63 | 256 | IPR044676 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g2551 | 263 | Pfam | Myb-like DNA-binding domain | 21 | 65 | IPR001005 | - | |
Aed5g2551 | 263 | PANTHER | HOMEODOMAIN-LIKE PROTEIN-RELATED | 63 | 256 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed5g2551 | Aed-Chr5 | 26396901 | 26398512 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed5g2551 | 18 | 258 | MYB Transcription Factor Family | AT1G68320 | 37.676 | 1.18e-46 | 155 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Aed5g2551 | Myb_DNA-binding | 1.8e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed5g2551 | K09422 | - | gmx:778042 | 379.793 |