Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2534 ATGTATGTTTCAATCCTCCTTCCCCTCCTTTCTACCTTAATTTTCATATTACTACGTCGAAAACAAAAAAAAGATGCGCAGAGACAGCCCCCAGGTCCACTGGGGTATCCGGTAATCGGTAACCTGCACATGTTAGGGAAGCTCCCACACCGCAAGCTTCAAGACTTGGCCACAAAATACGGAGCCATCATGTCTCTACGACTGGGACAGATCCCAGCCGTTGTGGTGTCGTCCTCAGAGGCCGCGAAGCAATTCCTGAAAACGCACGACGTCGTATTCGCCGGTCGTCCTCGACATGAAGCCGCCATATACGGCACCAAAGGGGTGGCGTTGTCGGAGTACGGAGCGTACTGGCGTAACATGAGGAAAGTGTGCACCTTGCAGCTTCTGAGCGCGTCAAAGGTTGAATCCTTTGCACCTATGAGGAAGAGGGGGCTGGAAAAGACGGTGAAGTCGCTCCAGAAAGCCGCAATGCTGGGCGAGGCTGTGGACCTTAGCGAGGTGGTGCACAACGTTGTGGAAGATTTTGTGTACAAAATGGTGTTGGGACGTACCAAGGATGCTGAGTTTGATTTGAAGGGCTTGGTTCGAAACAAGATTAACCTTATTGGTGCATTCAATCTTGCAGATTATGTGCCTTCCCTTGCCCCCTTCGATCTTCAGGGATTAAAACGAAGGTCCAAGAAAATTAGTAAATCACTTGATCAAGTGCTGGAGAAGATAATAAAGGAGCATGAAGACAGTTCAGACGTACAAAATGGACAGCACCATAGGGATTTCGTAGACATATTACTCTCGTTGATGCACCAGCCCATGGATCCAAACGATGAACAAAGCCATGTCATTGATCGAACTAATATTAAGGCTATACTCTTAGATATGATTGGTGGGGCATTTGACACCACTTCAACGGTTGTGGAGTGGACACTATCCGAGCTCCTAAGTCATCCAAGAGTGATGAAAAACCTTCAAGAAGAGCTTGATAATGTGGTTAGGAGGGACAAAATGGTGGAGGAAAATGATTTGGCAAAGTTAAGTTACTTGGATATTGTGATCAAGGAGACCCTGAGATTGTACCCTCCTGGACCATTAGTCCCTCGAGAGTCAACAGAGGATGCTATGGTTCAGGGTTATTTCATAGAGAAAAAATCAAGAATCATCATAAATTTATGGGCAATGGGAAGAGATTCTAAGATATGGTCTGATAATGCTGAAGTATTTTATCCAGAGAGATTCATCAACAACAATATAGACTTTAGAGGACATGACCTCCAATTTATACCATTTAGTTTTGGTCGTAGAGGATGCCCTGGAATGAATTTGGGCTTAATTACGGTTAAACTTGTTGTGGCTCAGTTGGTGCATTGCTTTAGTTGGGAACTTCCAGGAAGTATTGCCCCAAATGAGTTGGACATGACTGAGAAATTTGGCCTCACAATACCAAGAGTCGAGCACTTGCTTGCTAAGCCTAGCTATCGTCTGCTCAGGGGAACCCCTCATAGTCAACCAAAATGA 1515 0.4548 MYVSILLPLLSTLIFILLRRKQKKDAQRQPPGPLGYPVIGNLHMLGKLPHRKLQDLATKYGAIMSLRLGQIPAVVVSSSEAAKQFLKTHDVVFAGRPRHEAAIYGTKGVALSEYGAYWRNMRKVCTLQLLSASKVESFAPMRKRGLEKTVKSLQKAAMLGEAVDLSEVVHNVVEDFVYKMVLGRTKDAEFDLKGLVRNKINLIGAFNLADYVPSLAPFDLQGLKRRSKKISKSLDQVLEKIIKEHEDSSDVQNGQHHRDFVDILLSLMHQPMDPNDEQSHVIDRTNIKAILLDMIGGAFDTTSTVVEWTLSELLSHPRVMKNLQEELDNVVRRDKMVEENDLAKLSYLDIVIKETLRLYPPGPLVPRESTEDAMVQGYFIEKKSRIIINLWAMGRDSKIWSDNAEVFYPERFINNNIDFRGHDLQFIPFSFGRRGCPGMNLGLITVKLVVAQLVHCFSWELPGSIAPNELDMTEKFGLTIPRVEHLLAKPSYRLLRGTPHSQPK 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2534 504 SUPERFAMILY Cytochrome P450 30 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Aed5g2534 504 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 Gene3D Cytochrome P450 15 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 Pfam Cytochrome P450 30 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed5g2534 504 Coils Coil 320 340 - -
Aed5g2534 504 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 494 - -
Aed5g2534 504 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2534 Aed-Chr5 26301041 26302845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2534 21 488 Cytochrome P450 AT3G48310 40.506 2.10e-122 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2534 - - gmx:100814172 707.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2534 5 26301041 26302845 Aed5g2534 5 26301041 26302845 ECH
Aed7g0183 7 1299802 1301433 Aed5g2534 5 26301041 26302845 PCT