Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2532 ATGCCACGGCGGGTTCGGCCCCGTCTTCGCCGGCACCCTTGTCGGCGCCCCCGTCGCCGTGAAGCTCATGGACTCCGCCTCCTCCAACCACCACCAGGGCGAGCGCGAGTTCCACAACGAACTCTTCTTCGCCTCGAAACTCCTCTCTCGCCACGTCATCACCGCCACGCACTTCTCCTCCAACCCAAAATGACGCCGCTTCCTCTTGGTCTACGAGCTCATGCACAACGGCAACCTCCAAGACGCGCTTTTGCACCACAAAACACGCATTTTTCGATTATCCTTAACATAGCGAAAGGAATTCACTTTCTTCACTCCTGCGACTCCCCTGTTATTCACGGTGATATAAAACCGAGTAACTTTTTGTTTGATGGCGATTTCTCGCTCAGAATTGGGGACTTTGGGCTTGCGAGGTTGCGTTCGGAGCCTCCCAGTTTTGAAATTGAGGTTATGGAATGTGGGAGTGTTGATAAAGATGATGAGAATAGAAAGAAGAAGGAAGAGGAGATTGTTGTTGGTGATTGTGGATCGGTTGAGAGTGCTCAGCTTAAAAGGTGGAGTTTGGGTTTATTATTAATTTTAAAAAATGAGTTATTATTATTAATTTTTTTAAAAAATATAAATTATTATTATTAA 636 0.467 MPRRVRPRLRRHPCRRPRRREAHGLRLLQPPPGRARVPQRTLLRLETPLSPRHHRHALLLQPKMTPLPLGLRAHAQRQPPRRAFAPQNTHFSIILNIAKGIHFLHSCDSPVIHGDIKPSNFLFDGDFSLRIGDFGLARLRSEPPSFEIEVMECGSVDKDDENRKKKEEEIVVGDCGSVESAQLKRWSLGLLLILKNELLLLIFLKNINYYY 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2532 211 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 88 180 - -
Aed5g2532 211 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2532 211 ProSitePatterns Serine/Threonine protein kinases active-site signature. 111 123 IPR008271 GO:0004672|GO:0006468
Aed5g2532 211 MobiDBLite consensus disorder prediction 1 22 - -
Aed5g2532 211 SUPERFAMILY Protein kinase-like (PK-like) 85 145 IPR011009 -
Aed5g2532 211 MobiDBLite consensus disorder prediction 1 35 - -
Aed5g2532 211 Pfam Protein kinase domain 86 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2532 211 PANTHER OS07G0586332 PROTEIN 88 180 IPR044576 -
Aed5g2532 211 Gene3D Transferase(Phosphotransferase) domain 1 70 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2532 Aed-Chr5 26294969 26295625 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2532 95 142 MAP Kinase Kinase Kinase AT3G06620 45.833 3.86e-11 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Aed5g2532 Pkinase 2.3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2532 - - gsj:114390604 144.05