Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2517 ATGCAAAACCGCGTTAATTGGAATTGTAACGCTGATGATCCAGCTGGGAGGAACGTGGGTCTCAATCGCTACACTTTCCAGTGGTTGTCGTTTTCCGTTCCTCAGGGAACAGCTGTCCCTTTGATGAATTATTTATCGCTCTCTCTCTCTCTCTCTCTATCGGTCATAAAGAATAGCCTGCCTCTCCTCCTTTCTTTCTCTCATCCATTCTCTTCTCCACACTATGAGATGAAGAAGAAGGAAGCATACTCCATTTCCATTCTCACACTCTTCATTGCCTTGTCCCTAACCTCTCCACTTAGCAATGGCCACCTCACCCACGCCGAAACAATGTACTACAGAGGAGAGAATGTCACCCTTGACTCTTCTCTTGTCTTCGAAAATGACCGTCTCAGAAGCGCTTATATAGCTTTGCAAGCTTGGAAGCAAGCCATTTTGTCTGATCCACGGAACCAGACAACTGACTGGGTTGGATCCGGCGTGTGCAGCTACACCGGAGTCTACTGTGCTCCCGCGCTTGACAACCCCAACATCCGTACCGTAGCCGGCATTGATCTCAACCACGGCGATATTGCCGGTTATTTACCGGAAGAGCTCGGTTTGCTGGTAGATCTTGCACTCTTTCACGTAAACTCCAATAGATTCTGCGGCACTGTTCCGCACAAGTTCGACAAGTTGATACTGCTTTACGAACTTGATCTCAGTAACAACAGGTTCGCAGGGAAGTTTCCTGAGGTCGTTCTGCGGCTTCCTTCTCTCAAGTTCTTGGATCTCCGGTTCAACGAATTCGAAGGCACGGTGCCCAGGGACTTGTTCGATAAGGATCTCGACGCCATTTTCATAAACGACAACCGTTTCGTCTTTGACCTTCCCGAAAACCTGGGCAACTCGCCTGTCTCCGTCATCGTGCTCGCCAACAACAGGTTCCACGGCTGCATTCCACCCAGCTTGGGAAACATGTCCAACTTGAACGAGATCATTTTCATGAACAACGCATTTCGTTCCTGCTTGCCTCATGAGATAGGGCTTCTCAAGAACCTCACGGTGTTCGACGTCAGCATTAATCAACTTCTTGGTCCCTTGCCTGACGCCGTTGGAAACGCCCTGAGCCTGGAGCAGCTCAATGTGGCGCAGAACTTGCTTTCTGGTCAAATTCCAGCTAGTATTTGTATGTTGCCTCACCTTCTGAATTTCACTTATTCGAATAACTTCTTCACCGGCGAGCCTCCGGCATGTCTCGCCTTGCCGGCGTTTGACGACAGGGTCAACTGCTTACCGTCAAGGCCGGCGCAGAGGCCTCCGGGGCAATGTAAGTCGTTCTTGTCTAAACCTGTAGACTGTAACTCCTTCAAGTGTAAACCATTTGTTCCTTCACCAGTACCGTCACCTACCACACCTTCACCATTCCCTTCACCTCCGTCACCTTCTACACCTTCACCTACGACTCCTGTAATTCCTGCACCTCCGTCACCTTCACCATTCCCTACACCTACGACACCTGTAACTCCTTCACCTTCTACGCCTTCACCATTCCCTTCACCTACGACACCTGTAACTCCTTCACCTTCTGCACCTTCACCTACGACACCTGTAACTCCTTCACCTCCATCACCCACAACACCTTCCCCATTTCCTTCACCCCCATCACCTACAACACCTTCACCTCCGTCACCCACAACACCTTCACCATTTCCCTCACCTACGACACCTTCACATGCAACTCCTCCAGTTACGGGACATTACCCTCCACCACCTTCTCCAGGGCAGTTGCCAACGCCACCACATTCTTCCCCTGCACCACCTGTGTACCCTCCGCGGCATTCTCCACCTTCACCTCCATCAAATTCACCATCGCCCTCTTCTCCTACATTCTTGCCACCACCACCTTCTCATAACTACGGTACGCCGCCACCTTCACCTTCACCACCGCATCACTCACCCGCCAACCCTGTTTATCCTTATTTATCGCCGCCACCTCCTCCTTCACCTCCACCACCTTGTACAGAACTTCCTCCACCCCCTTCCCCATCTCATACACCTTACCTTCCACCACCATCCCCGTCTCCCCCTCCCCCACCACCACCGGTATACCATTTTCCACCGCCGGCATCACCGCCTCCGTGCGAAACTCCACCTTCAGTTTCTCTGCCTCCACCACCTTCCCCTGTATATGAAGGACCATTGCCACCTATCGTTGGAGTACCATACGCGTCGCCTCCACCGCCACCCTTTTATTGA 2238 0.5165 MQNRVNWNCNADDPAGRNVGLNRYTFQWLSFSVPQGTAVPLMNYLSLSLSLSLSVIKNSLPLLLSFSHPFSSPHYEMKKKEAYSISILTLFIALSLTSPLSNGHLTHAETMYYRGENVTLDSSLVFENDRLRSAYIALQAWKQAILSDPRNQTTDWVGSGVCSYTGVYCAPALDNPNIRTVAGIDLNHGDIAGYLPEELGLLVDLALFHVNSNRFCGTVPHKFDKLILLYELDLSNNRFAGKFPEVVLRLPSLKFLDLRFNEFEGTVPRDLFDKDLDAIFINDNRFVFDLPENLGNSPVSVIVLANNRFHGCIPPSLGNMSNLNEIIFMNNAFRSCLPHEIGLLKNLTVFDVSINQLLGPLPDAVGNALSLEQLNVAQNLLSGQIPASICMLPHLLNFTYSNNFFTGEPPACLALPAFDDRVNCLPSRPAQRPPGQCKSFLSKPVDCNSFKCKPFVPSPVPSPTTPSPFPSPPSPSTPSPTTPVIPAPPSPSPFPTPTTPVTPSPSTPSPFPSPTTPVTPSPSAPSPTTPVTPSPPSPTTPSPFPSPPSPTTPSPPSPTTPSPFPSPTTPSHATPPVTGHYPPPPSPGQLPTPPHSSPAPPVYPPRHSPPSPPSNSPSPSSPTFLPPPPSHNYGTPPPSPSPPHHSPANPVYPYLSPPPPPSPPPPCTELPPPPSPSHTPYLPPPSPSPPPPPPPVYHFPPPASPPPCETPPSVSLPPPPSPVYEGPLPPIVGVPYASPPPPPFY 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2517 745 PANTHER LRR EXTENSIN-LIKE PROTEIN 119 544 - -
Aed5g2517 745 Pfam Leucine rich repeat N-terminal domain 137 169 IPR013210 -
Aed5g2517 745 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 119 544 - -
Aed5g2517 745 SUPERFAMILY L domain-like 135 416 - -
Aed5g2517 745 Gene3D Ribonuclease Inhibitor 134 420 IPR032675 -
Aed5g2517 745 MobiDBLite consensus disorder prediction 461 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2517 Aed-Chr5 26184069 26187686 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2517 92 459 Leucine-rich Repeat extension Gene Families AT3G24480 71.693 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2517 - - gmx:100782090 656.751