Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2515 ATGACTGGCCTTACTAATTGCAACAAGGTCCCCACGGTCAACTTCACCAAGCTCTTCATCAACGGACACTTCGTTGACTCTCTCTCAGGAAAGAGATTTGAGACAATAGATCCAAGAACAGGAGAAGTTATAGCGAGAATTAGTGAGGGAGATAAAGAAGACATTGATCTTGCTGTTAAAGCAGCACGTCATGCATTTGACAATGGTCCATGGCCTCGCCTCCCCGGCTCTGAGAGAGCAAAAATATTGGTGAAGTGGGCGCAGCTAATTGATGAAAACGCAGAAGAACTAGCAGCACTAGATGCCATTGATGCGGGGAAGTTGTACCATATGTGTAAGAATTTGGAAGTTCCATCTGCAGCAAATACTCTGCGTTACTACGCTGGGGCTGCTGATAAGATTCATGGAGAGGTGTTGAAAATGTCCCGAGAGTTCCATGCCTACACATTGCTGGAACCAGTTGGTGTTGTTGGACACATTACTCCCTGGAATTTCCCCAACACCATGTTCTACATCAAGGTTGGACCTTCTTTAGCCGCTGGCTGCACCATGGTCGTCAAGCCCGCCGAGCAAACTCCTCTCTCTGCTTTGTTCTCTGCTCATCTTGCTAAATTGGCTGGAATCCCTGATGGAGTGATCAATGTAGTGCCCGGATTTGGCCCAACTGCTGGTGCTGCATTAAGTTCACACATGGATGTTGATAAGATCAGCTTTACTGGTTCAACACAAACAGGCCGTGAGATAATGCAGGCTGCAGCTAAGAGTAACTTGAAACAAGTTTCACTTGAATTAGGAGGCAAGTCACCCCTCATAATTTTTGATGATGCTGATATAGACAAAGCTACTGATCTGGCTCTACTAGGCATCCTATATAACAAGGGAGAAGTTTGTGTTGCAAGTTCCCGTGTGTTTGTTCAAGAAGGTATCTATGATGAATTTGAGAAAAAACTGGTGCAGAAGGCAAAAGCTTGGGTCGTTGGGGATCCCTTTGATCCTAAAGTTCAACAAGGGCCTCAGGTTGACAAGGAACAATTTGAAAAGATTCTTTCATATATTGAGCATGGAAAGAAAGAAGGGGCTACCCTTTTGACCGGGGGTAAAATAGTGGGAAACAAGGGCTATTTCATTGAGCCAACAATTTTCTCCAATATAAGGGAGGATATGGTTATAGCACAGGATGAAATATTTGGCCCTGTGATGGCACTGAAGAAGTTTGAGACCGTTGAGGAAGCAATTAAGAGTGCTAACAATACAAAGTATGGGCTAGCAGCAGGCATAGTGACAAAGAATTTGGATACGGCAAACACAGTGTCTAGGTCAATTCGTGCAGGCACCATTTGGATAAACTGCTATTTTGCCTTTGGCGATGATGTTCCATTTGGAGGGTATAAGATGAGTGGATTTGGAAAAGATCATGGATTGGAAGCCCTTCACAAGTACCTACAAGTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCTTTGA 1491 0.4413 MTGLTNCNKVPTVNFTKLFINGHFVDSLSGKRFETIDPRTGEVIARISEGDKEDIDLAVKAARHAFDNGPWPRLPGSERAKILVKWAQLIDENAEELAALDAIDAGKLYHMCKNLEVPSAANTLRYYAGAADKIHGEVLKMSREFHAYTLLEPVGVVGHITPWNFPNTMFYIKVGPSLAAGCTMVVKPAEQTPLSALFSAHLAKLAGIPDGVINVVPGFGPTAGAALSSHMDVDKISFTGSTQTGREIMQAAAKSNLKQVSLELGGKSPLIIFDDADIDKATDLALLGILYNKGEVCVASSRVFVQEGIYDEFEKKLVQKAKAWVVGDPFDPKVQQGPQVDKEQFEKILSYIEHGKKEGATLLTGGKIVGNKGYFIEPTIFSNIREDMVIAQDEIFGPVMALKKFETVEEAIKSANNTKYGLAAGIVTKNLDTANTVSRSIRAGTIWINCYFAFGDDVPFGGYKMSGFGKDHGLEALHKYLQVKSVVTPIYNSPWL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2515 496 Pfam Aldehyde dehydrogenase family 25 486 IPR015590 GO:0016491
Aed5g2515 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 266 455 IPR016163 GO:0016620
Aed5g2515 496 SUPERFAMILY ALDH-like 10 492 IPR016161 GO:0016491
Aed5g2515 496 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 290 301 IPR016160 GO:0016491
Aed5g2515 496 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 6 496 - -
Aed5g2515 496 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 6 496 - -
Aed5g2515 496 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 262 269 IPR029510 GO:0016491
Aed5g2515 496 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 20 484 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2515 Aed-Chr5 26175366 26178609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2515 7 496 Aldehyde Dehydrogenase Gene Family AT3G24503 70.766 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2515 K12355 - gmx:100811540 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2515 5 26175366 26178609 Aed7g0150 7 1039097 1043959 PCT