Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2506 ATGGAAAACCAAAACCGTCTCAAACTGCGAATCTCTCGCATGTTCCGATCCTCATTCGGGTCGTGCAGAACCCGTAACCTAACCGATGTAATGGAAAAAGCTGTCTTTGCGCCACCCAACCCGATCGAACCACCCTCTCCCAAAACAATACCCATTCCCCCCATTTGTAGGCCCAAAACCATCAACGACACTTGCATCCTGTCGTTTAAGGATTCTCATTCTCTCCCCAGACGCAAAATCTCCGAGTGGTCATCACCTTTTGTCTTGGCTGGCGGAAACAATAACAACAACCTCAACCTTAACCTCGGTGTCATGTCGTGCCCCCTCACTTCCCCAAAGATTTCCCTCAACACAATCCACGAACACGATTACGGTTTCGACGACAAAAAAAAGGCCAGGACCAAGAAGAAGAAGAAGAACAAGAGACGTGCCCAGAAGAAAAGGGACCTTTTCCCTTTCAATTCATGCGCCAAAGACACCAACTTTGGTGGCTACTGGTGGTATAGCAGCGACGAAGACGACGAGACCGACACTCTTTTCTCCTCGAAAAGCCTTTCCTCGGATTCCTCGCGCTCCCGGCGCCGGCACCGGAAGAGTGACCGGAGCTCCGACATGGGTGTTCTGCCGCTGCACGGGAAGGTGAAGGACACGTTCGCGGTGGTGAAGCGCTCCAGCGACCCTTACAGTGATTTCAGGACTTCGATGCTGGAAATGATCGTCGAGAAGCAGATTTTTTCGCCAGCGGATTTGGAGAATCTCTTGCAGTGTTTTCTGTCGCTGAATTCGTATCACCATCATAAGATCATTGTCCAAGTCTTCACCGAGATTTGGGAGGCTCTGTTCTCTGACTGGTTTTGA 858 0.5058 MENQNRLKLRISRMFRSSFGSCRTRNLTDVMEKAVFAPPNPIEPPSPKTIPIPPICRPKTINDTCILSFKDSHSLPRRKISEWSSPFVLAGGNNNNNLNLNLGVMSCPLTSPKISLNTIHEHDYGFDDKKKARTKKKKKNKRRAQKKRDLFPFNSCAKDTNFGGYWWYSSDEDDETDTLFSSKSLSSDSSRSRRRHRKSDRSSDMGVLPLHGKVKDTFAVVKRSSDPYSDFRTSMLEMIVEKQIFSPADLENLLQCFLSLNSYHHHKIIVQVFTEIWEALFSDWF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2506 285 MobiDBLite consensus disorder prediction 127 146 - -
Aed5g2506 285 MobiDBLite consensus disorder prediction 181 208 - -
Aed5g2506 285 Pfam Transcriptional repressor, ovate 224 281 IPR006458 -
Aed5g2506 285 ProSiteProfiles OVATE domain profile. 220 279 IPR006458 -
Aed5g2506 285 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 218 281 IPR006458 -
Aed5g2506 285 MobiDBLite consensus disorder prediction 131 146 - -
Aed5g2506 285 PANTHER TRANSCRIPTION REPRESSOR OFP8-LIKE 4 283 - -
Aed5g2506 285 Coils Coil 129 149 - -
Aed5g2506 285 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 4 283 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2506 Aed-Chr5 26127164 26128021 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Aed5g2506 Ovate 3e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2506 - - gmx:100776613 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2506 5 26127164 26128021 Aed5g2506 5 26127164 26128021 ECH