Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed5g2503 | ATGCCTTCTCTCTCCGTCTTCCCATCGCTTCAAAACCCTAACTTGAGCCAACCCCACCTCTCCATTTTCCATGCGATTCCATTACCGCCACTCATCAAAAGCTCTGTAACTCTTCATCGTAGAATCCTCTGCAAAGCTTTCAGGGATTCCGGCGAGGACATCAAGGCGGTGCTCAAGTCTGACGACGGGGGTGGCGGAGATGATGGCGGCGGCGGCGGCGACGGTGGGGGTGACCGGGATGCGGAGAAGAAGAAAGAAGGGCCTTTGCCGGAGTGGCTCAATTTCACTTCTGATGACGCCAAAACGGTGCTTGCGGCTCTCGCAATTTCGCTCGCGTTTCGAACGTTCGTGGCAGAGCCGAGGTACATTCCTTCGCTGTCTATGTATCCTACATTCGATGTTGGAGATCGAATTGTTGCTGAGAAGGTATCATACTATTTTAGAAAACCATGTGCAAGTGACATAGTGATATTTAAAAGCCCTCCGGTGCTTCAAGAAGTTGGATATAGCGATGATGATGTTTTTATAAAGCGTGTGGTTGCAAAGGAAGGTGATATTGTGGAGGTTCGTAAAGGGCATCTTGTAGTTAATGGGGTTGAGAGGAATGAAAAGTACATCCTTGAACCACCTGCTTATGAGATGAAACCCACGCGTGTGCCAGACAACTACGTTTTTGTAATGGGAGACAACCGCAATAACAGCTATGACTCCCATGTTTGGGGTCCCCTTCCAGCCAAGAATATAATAGGTAGATCAGTATTTCGCTATTGGCCACCAAATAGAATTGCTGGCACTGTTTCTAAGGACAGTTGCACTGTTGAAACCACGCAAGAGAGTGCAGAGACAGCTCCAGCTCCATCTCCAGTTATACCAACTCAATGA | 882 | 0.4841 | MPSLSVFPSLQNPNLSQPHLSIFHAIPLPPLIKSSVTLHRRILCKAFRDSGEDIKAVLKSDDGGGGDDGGGGGDGGGDRDAEKKKEGPLPEWLNFTSDDAKTVLAALAISLAFRTFVAEPRYIPSLSMYPTFDVGDRIVAEKVSYYFRKPCASDIVIFKSPPVLQEVGYSDDDVFIKRVVAKEGDIVEVRKGHLVVNGVERNEKYILEPPAYEMKPTRVPDNYVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPNRIAGTVSKDSCTVETTQESAETAPAPSPVIPTQ | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed5g2503 | 293 | TIGRFAM | sigpep_I_bact: signal peptidase I | 101 | 259 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Aed5g2503 | 293 | MobiDBLite | consensus disorder prediction | 57 | 89 | - | - | |
Aed5g2503 | 293 | CDD | S26_SPase_I | 119 | 251 | IPR019533 | GO:0004252|GO:0006465 | |
Aed5g2503 | 293 | SUPERFAMILY | LexA/Signal peptidase | 114 | 263 | IPR036286 | - | |
Aed5g2503 | 293 | PANTHER | SIGNAL PEPTIDASE I | 82 | 269 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Aed5g2503 | 293 | ProSitePatterns | Signal peptidases I signature 3. | 224 | 237 | IPR019758 | GO:0004252|GO:0016021 | |
Aed5g2503 | 293 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 175 | 187 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Aed5g2503 | 293 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 116 | 132 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Aed5g2503 | 293 | PRINTS | Bacterial leader peptidase 1 (S26A) family signature | 219 | 238 | IPR000223 | GO:0006508|GO:0008236|GO:0016020 | |
Aed5g2503 | 293 | MobiDBLite | consensus disorder prediction | 270 | 293 | - | - | |
Aed5g2503 | 293 | PANTHER | THYLAKOIDAL PROCESSING PEPTIDASE 2, CHLOROPLASTIC-RELATED | 82 | 269 | - | - | |
Aed5g2503 | 293 | MobiDBLite | consensus disorder prediction | 73 | 89 | - | - | |
Aed5g2503 | 293 | Pfam | Signal peptidase, peptidase S26 | 100 | 257 | IPR019533 | GO:0004252|GO:0006465 | |
Aed5g2503 | 293 | ProSitePatterns | Signal peptidases I serine active site. | 125 | 132 | IPR019756 | GO:0004252|GO:0016021 | |
Aed5g2503 | 293 | MobiDBLite | consensus disorder prediction | 270 | 287 | - | - | |
Aed5g2503 | 293 | Gene3D | Umud Fragment, subunit A | 113 | 273 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed5g2503 | Aed-Chr5 | 26100646 | 26103264 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed5g2503 | 128 | 258 | MADS-box Gene Family | AT1G29960 | 31.818 | 5.19e-12 | 60.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed5g2503 | K03100 | - | gmx:100815810 | 473.781 |