Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2498 ATGTATAGATCATTTCTGAGATGTGATGATCCAAAAGGAGTAGTAGAATGTGAGACAATCAGGAAATACAGGAGTCGATCTCACAAGGTGAAGGAGAAGACAAGAATCCAGAAGACAGATGAAAACTTGGAGATGTCCTTGTCCTTGATGAACAAAAGATATAAAGGAGAGAATAAGGTCCCAAAAGGATGTGATGGAAATCTCATTGCTCCATCATCTTTGCAGCTCACACAAGTCTCCAGAGGCTATCAAAGTCTGAACATGCCAGATTCATGGTCTAGAGATATTATGTGTGATGAAAAGTCTGAAGATATTGCAAAAGGTATTGTTAAAGAAGCTCTTGGTCTGCAACAAGATTCTCTAATCATGCTTCGCAAGTTGCAAGAGGAGGCTTCGCCACATTCAGCTTCTTTTAGGAGAAAACACACTATGAAACCTGAAAGAGACAGAATTGATGCAAAGATGATTGGTAGAACGCAGGCTTCAGCTGGTGGTTCTTCAAGTAATTGCCAAGAGGAACTTAAAAATGTGATTAAGGAGAGTTTAGTTAGGCAAAATATGTTTCCAAAGACCACTGAAAGATTGGATTCAGGTTCAGAAAGTTTTTCTACAAGCACCAGCCAATATTCTGCGGTCAGGACTAACAGCCTTTTTGATCCTTCTTTCTCAGTAATAGCTTCAAAGATGGAAAGAGGACCTAGCCTTATTTTGAAGCTGATGGGTTTAGAAGAAGCCCCCTCAAAATCATTTCCAGCTGAGAAGGCCCTGAGGGAAAATCTTGACACCATGCATTTCAAAGGAATTTTGAAGGAAAGTTTTGTCGAAGAGCCCAAGTTTCATGTGCATCATTTCAATGATACCAGTTCCAAGCAGCTTGGTGATTTATCTCACATTGCACTTATGAAACCTCTTTACCAGGAATCAGTAAAAAGTACCTACATGCGAGTTCCTCCAAAAGAGTTTTCCATAACAAAACTGAAAGCAGAAATAGCCTCTTCCAAAACTATCAAACATCGGAAAGATTCCAGTTCCACCAACATGGAAAAGGGACCTCAATTTCTCAAAGAGGTTATGAAACGGGATGGAAAATCAGGTAAGGTCAAACTGTATTGTCACACATCACAGGCAAATGAGACAATTGATAAAAAATGGAAGGTACAGTCCATGAGTAGAAAACAGCCACAAAAGGATCAATATCAACGAGTAATCCCCTCCACAAAATTGAGGAAGCTAAAAAGTGGATCCAGAATTGACAAGAATGAGATTTCCTGCCTACAGAGCACAGATTCCTTAACACGTAGAAAGAATCAGATGAAGATCCAAAGCCCTGTTGCTGAGTCTGAACCACCTAAACTAACTGTAAGTTTACTTTTTACTACATACATACATATATACGTGGAAACTTATATGTTGAAAACAGTGTTTGGATTATTGAACAAATCAGGAAGGGAGAAGAGAAGAAAATTTACAGAAAGTAGGAATGCATTGAAAGCTTCTTCATCACATGACATTCATTTTGATATCACAGAAAAATGCAAGCGGATGAAGAGTTCTTCAGGCGATGACAATGACATTATTAAGCAGAGAAATGGTGCTATGACAGCTTATAGCATTAATGGTGATAAAGAGGGGACTGCTGAGCTGAAACATTTTCTATCAAGCAGTCCTTCATTCATTGGACATGCAAAGAAGCTCTTCAATCTTGAAATGGATTGTCCCAACACCCTACAAAGGGATGAAACTATTTACAGCATGGCCAATCTCAGGCTTTATTTGGATTGTGCTTATGAACTCGCTGAGCGTAAAAGCCTTCATGAGTCACAAGTAGTTTGTTCTTTCCTGCTTTCTTGTGGGGGGGACTCAAGATTACACATCTCCTTAGGCAGGTTGGTTGAAGAAATCTGTAATGGCATTGAGAATCTGAAATTATTTTACAAAGAAGATTCTGGGGATGAGGAAGATTTTGCAGGCAATGATGTGTTTGCAATGATGGAGAAAGACATGAAGTGCAATGGAGAGATTAACAGTATGTGGGAGAAGGGTTGGAGGCGAGGATTTTCTGCAGATGAGGCTCAACTAGTTGTCAATAAAATTGAGATTCTGCTTATAAGTGGATTAATTGAGGAGCTTATTGTAAATTTATGA 2145 0.3907 MYRSFLRCDDPKGVVECETIRKYRSRSHKVKEKTRIQKTDENLEMSLSLMNKRYKGENKVPKGCDGNLIAPSSLQLTQVSRGYQSLNMPDSWSRDIMCDEKSEDIAKGIVKEALGLQQDSLIMLRKLQEEASPHSASFRRKHTMKPERDRIDAKMIGRTQASAGGSSSNCQEELKNVIKESLVRQNMFPKTTERLDSGSESFSTSTSQYSAVRTNSLFDPSFSVIASKMERGPSLILKLMGLEEAPSKSFPAEKALRENLDTMHFKGILKESFVEEPKFHVHHFNDTSSKQLGDLSHIALMKPLYQESVKSTYMRVPPKEFSITKLKAEIASSKTIKHRKDSSSTNMEKGPQFLKEVMKRDGKSGKVKLYCHTSQANETIDKKWKVQSMSRKQPQKDQYQRVIPSTKLRKLKSGSRIDKNEISCLQSTDSLTRRKNQMKIQSPVAESEPPKLTVSLLFTTYIHIYVETYMLKTVFGLLNKSGREKRRKFTESRNALKASSSHDIHFDITEKCKRMKSSSGDDNDIIKQRNGAMTAYSINGDKEGTAELKHFLSSSPSFIGHAKKLFNLEMDCPNTLQRDETIYSMANLRLYLDCAYELAERKSLHESQVVCSFLLSCGGDSRLHISLGRLVEEICNGIENLKLFYKEDSGDEEDFAGNDVFAMMEKDMKCNGEINSMWEKGWRRGFSADEAQLVVNKIEILLISGLIEELIVNL 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2498 714 PANTHER OS01G0228800 PROTEIN-RELATED 253 712 - -
Aed5g2498 714 PANTHER OS01G0228800 PROTEIN-RELATED 1 253 - -
Aed5g2498 714 PANTHER OS01G0228800 PROTEIN 253 712 - -
Aed5g2498 714 PANTHER OS01G0228800 PROTEIN 1 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2498 Aed-Chr5 26085096 26087578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2498 548 711 TRM (TON1 Recruiting Motif) Superfamily AT3G24630 34.118 5.59e-18 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2498 - - gmx:102667535 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2498 5 26085096 26087578 Aed5g2498 5 26085096 26087578 ECH
Aed5g2498 5 26085096 26087578 Aed7g0125 7 867995 872369 PCT