Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2494 ATGGGGGAAGGTGAAGGTGAGGGGAATGATAGCGCTGCCAAAAATGATGTGTCAAACGATGTCGTAGTGAATGCGCTTTTGCCGTCCGATGTTCCCGCCAAGAAGCTCGCCAGGCAGCTCGATTTCACCGGCTTCGGTGGGATAACGGCGCCGCCACAGCCGCCGATTGTTCTGCCGCTGCCGCCTTCTGCTTCCGTCAGGGTTGGGAAACCAGAATCTCCTAAATCGAAACCGAGGTCTGGCTTTGAAATTAAAGAAGCTACTCCAAAGAAGCAGAAGCAGTGCAATTGTAAACATTCAAAATGCCTGAAGCTATATTGTGAATGTTTTGCTTCGGGAATATATTGTGATGGTTGCAACTGTGTAAATTGTTATAACAATGTGGAAAATGAAGCTGCTAGACGAGAAGCAGTTGAAGCCACTTTAGAACGGAATCCAAATGCGTTCAGGCCAAAAATAGCGAGTAGCCCTCATGGAACACGTGATAGCAGGGAGGATGCTGGGGAAGTTATGATATTGGGAAAGCACAACAAGGGGTGCCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAATGCTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGATTGCAAAAACTTTGAGGGAAGTGAAGAGAGACAGGCTTTGTTCCATGGAGATCAAAATAACAACATGGTGTATATTCAGCAGGCAGCCAATGCTGCCATAACTGGAGCTATTGGTTCCTCTGGCTATTCTTCACCACCAATATCAAAGAAAAGAAAGGGTCAAGAACTCTTATTTGGGGCAAACGTCAAGGATCCATCAGTTGGCAGGCTGGGACAACAGGCAAACAATGTCAGAGTTCCTGCACCCTCCTCATCCTTGTCACCTATCCCAGGTGCTCGTGTTGGACCAGCAACATTAGGTCCTTCAAAATTAATGTACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACCTAAAGGAACTTTGCTCAGTTCTGGTGCTAGTATCTGGACAAGCCGCTAAGACAATTACAGACCAGAAAAATTTAATGGATAAGCATGCAGAAGATCAGACAGAAACTTCTCTTGCTTCTTCAACTCAGGAGCAATTACCAAGCCAAAAGGAAGCTAAAGTTGAGAAAGCCATGGCTGAGGATGATTGTTCGAGTGCAAACCAGACAGATAAAATCAGCCCGGATAATTCTTGTTCAGATGGTGCTGATTTCCCAAAAGGGAGACCAATGTCTCCTGGAACTTTAGCATTGATGTGCGATGAGCAAGATACAATGTTCATGACTGCTGCCTCCCCTGTTGGATCAAGGGCCCATGCTTGCAACACATCTTTGCAACCACCTTATGGACAAGGAATGACAGAGGTCTATGCAGAGCAAGAAAGGATTGTATTGATGAAATTTAGAGATTTTCTCAATAGGGTTATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCACTAGCCAAAAGTGAATTGGAGAGTCAAAAGGACCCAAACATCAATTGCACTGGAAATGCCAGTACTGAGACAGTGCATCAGCAGGGAGCCACTAATAATGGTGTTGCCAAAGCCACGGGCAACTCCATTACATCTACATCTTTGGTCCCTGGCAATCTTGTTCCCGAAAATGGGGAAACTTATCCGAAGGTTGAAAAATAG 1683 0.4474 MGEGEGEGNDSAAKNDVSNDVVVNALLPSDVPAKKLARQLDFTGFGGITAPPQPPIVLPLPPSASVRVGKPESPKSKPRSGFEIKEATPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCVNCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDAGEVMILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMVYIQQAANAAITGAIGSSGYSSPPISKKRKGQELLFGANVKDPSVGRLGQQANNVRVPAPSSSLSPIPGARVGPATLGPSKLMYRSLLADIIQPQHLKELCSVLVLVSGQAAKTITDQKNLMDKHAEDQTETSLASSTQEQLPSQKEAKVEKAMAEDDCSSANQTDKISPDNSCSDGADFPKGRPMSPGTLALMCDEQDTMFMTAASPVGSRAHACNTSLQPPYGQGMTEVYAEQERIVLMKFRDFLNRVITMGEINETKCSSLAKSELESQKDPNINCTGNASTETVHQQGATNNGVAKATGNSITSTSLVPGNLVPENGETYPKVEK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2494 560 MobiDBLite consensus disorder prediction 527 547 - -
Aed5g2494 560 MobiDBLite consensus disorder prediction 50 82 - -
Aed5g2494 560 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 178 212 IPR005172 -
Aed5g2494 560 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 92 127 IPR005172 -
Aed5g2494 560 MobiDBLite consensus disorder prediction 389 403 - -
Aed5g2494 560 MobiDBLite consensus disorder prediction 353 416 - -
Aed5g2494 560 MobiDBLite consensus disorder prediction 527 560 - -
Aed5g2494 560 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 62 533 - -
Aed5g2494 560 PANTHER TESMIN/TSO1-RELATED 62 533 IPR028307 -
Aed5g2494 560 SMART CXC_2 90 130 IPR033467 -
Aed5g2494 560 SMART CXC_2 175 216 IPR033467 -
Aed5g2494 560 Coils Coil 125 145 - -
Aed5g2494 560 ProSiteProfiles CRC domain profile. 91 215 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2494 Aed-Chr5 26064973 26071108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2494 1 501 CPP Transcription Factor Family AT4G29000 55.696 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Aed5g2494 TCR 2.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2494 - - gmx:100786353 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2494 5 26064973 26071108 Aed5g2494 5 26064973 26071108 ECH