Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2427 ATGTCCTCTAATCCAGTAATACTGCAGAGTTCGAAATTGACCAAGTATATACTGGAGACCAGCGTTTACCCACGAGAAGAAGAGATTCTCAAAGAGCTAAGGAATGCCACTGCAAGCCACCCTTGGGGCTTCATGGGTGCTGCACCTGATGCGGGGCAGCTAATGACCTTGCTCTTGAAGCTGTTGAATGCTAAGAAGACAATTGAAGTGGGAGTTTTTACTGGATACTCTCTTCTCGTCACTGCACTCACCATTCCTAATGATGGAAAGATTATAGCTATGGATCCAGACAGAGAAGCTTATGAGATAGGACTACCATTCATTAAAAAGGCTGGTGTAGAGCACAAGATCGACTTCATAGAGTCTCCAGCTCTACCGGCTCTTGATAAACTCTTGGAAGACGCTGGGAATAAGGAAAGTTTTGACTTTGCCTTCGTTGATGCTGACAAAGATAACTATTGGAATTACCACGAGCGGCTTATTAAACTGGTGAGGATTGGTGGGTTAATCATCTATGATAACACTCTCTGGGGTGGAACTGTTGCCTGGGCGGAAGAGGATGTTCCACCACCCAAAAGAAAATACAGGCAGGCTACACTAGCTTTCAACAAAGCAATTGCAGATGATTCTCGTATTGAAATTTCTGCCGTTTCAATTGGTGATGGCTTCACTATCTGCAGGCGTTCTCATTGA 693 0.4444 MSSNPVILQSSKLTKYILETSVYPREEEILKELRNATASHPWGFMGAAPDAGQLMTLLLKLLNAKKTIEVGVFTGYSLLVTALTIPNDGKIIAMDPDREAYEIGLPFIKKAGVEHKIDFIESPALPALDKLLEDAGNKESFDFAFVDADKDNYWNYHERLIKLVRIGGLIIYDNTLWGGTVAWAEEDVPPPKRKYRQATLAFNKAIADDSRIEISAVSIGDGFTICRRSH 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2427 230 CDD AdoMet_MTases 68 172 - -
Aed5g2427 230 Pfam O-methyltransferase 19 228 IPR002935 GO:0008171
Aed5g2427 230 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 11 228 IPR029063 -
Aed5g2427 230 PANTHER O-METHYLTRANSFERASE-RELATED 2 229 - -
Aed5g2427 230 Gene3D Vaccinia Virus protein VP39 2 229 IPR029063 -
Aed5g2427 230 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 2 229 - -
Aed5g2427 230 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 6 229 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2427 Aed-Chr5 25647669 25649148 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2427 7 228 Monolignol Biosynthesis Gene Families AT4G26220 65.315 1.23e-108 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2427 K00588 - gmx:100780516 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2427 5 25647669 25649148 Aed5g2427 5 25647669 25649148 ECH