Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2426 ATGGATGCACTAGCAAATATCGGTTATCAAGAATCTAAAGAAGCAATTCATATTAAATTATTAATAATTACAAGCCCTTCCTATGTTATGGATGTTAGTGTTAGTCCCATTGTACTTCACGCATACAGAGAAATGGAGAATATATCAAAGGCAGAAGAAGTGTTCCTCAATCCAAATCCAAATCCAAATCCAAGTATATTGCAGAGTGAGGGGTTACTAAAGTATATATTGGAGACCGGCGTTTACCCACGAGAACCGGAGATCCTCAAAGAGCTAAGAAATGCAACTGCAAAGCATCCTCTGGGCTTCATGGCTGCTGCACCTGATGCAGGGCAGCTATTGGGCATGCTCTTGAAGCTGTTGAATGCGAAGAAGACAATTGAAGTTGGAGTTTTTACTGGATACTCTCTTCTCCTCACTGCACTCGCCATCCCTAACGATGGAAAGATTATAGCTATGGATCCAGACAGAGAAGCTTATGAGATAGGACTACCGTTCATTAAAAAGGCTGGTGTAGAGCACAAGATTGAGTTTATAGAATCTCCAGCTTTACCGGTTCTTGATAAACTCTTGGAAGATGGTGCAAATGAAGGGAGTATTGACTTTGCCTTAATTGATGCTGACAAAACCAATTACTGGAACTACCACGAGAGGCTTATAAAGTTGGTGAAGATTGGTGGAATAGTTGCCTACGATAACGCACTTTGGGGAGGAAGTGTTGCATTGCCTGAAAAAGCAGTTTCGGAAGGCAAACGAGAATGGAGACGATTATCAATTGCTTTCAACAAAGCCATTTCAGAGGATTCTCGTCTTCAAATTGCTTTTCTTTCAATTGGTGACGGACTCATTATCTGCATGCGTCTTCGCTAA 870 0.4126 MDALANIGYQESKEAIHIKLLIITSPSYVMDVSVSPIVLHAYREMENISKAEEVFLNPNPNPNPSILQSEGLLKYILETGVYPREPEILKELRNATAKHPLGFMAAAPDAGQLLGMLLKLLNAKKTIEVGVFTGYSLLLTALAIPNDGKIIAMDPDREAYEIGLPFIKKAGVEHKIEFIESPALPVLDKLLEDGANEGSIDFALIDADKTNYWNYHERLIKLVKIGGIVAYDNALWGGSVALPEKAVSEGKREWRRLSIAFNKAISEDSRLQIAFLSIGDGLIICMRLR 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2426 289 Gene3D Vaccinia Virus protein VP39 60 289 IPR029063 -
Aed5g2426 289 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 65 288 IPR002935 GO:0008171
Aed5g2426 289 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 69 287 IPR029063 -
Aed5g2426 289 Pfam O-methyltransferase 80 287 IPR002935 GO:0008171
Aed5g2426 289 PANTHER O-METHYLTRANSFERASE-RELATED 61 288 - -
Aed5g2426 289 PANTHER METHYLTRANSFERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED 61 288 - -
Aed5g2426 289 CDD AdoMet_MTases 127 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2426 Aed-Chr5 25645316 25646471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2426 66 288 Monolignol Biosynthesis Gene Families AT4G26220 65.022 6.37e-108 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2426 K00588 - gmx:100795229 399.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2426 5 25645316 25646471 Aed5g2426 5 25645316 25646471 ECH