Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2419 ATGAGCAGCCAAAAGGGTCGTCATGAAGAAGAGATGGGTACCTCAGAAATCACCGGTAAAGTGGTTGTGGTTGCAGTTAAAGCTTCTAGAGATATTTCAAGGACTGCTTTGGTGTGGGCTTTGACTCATGTTGTTCAACCAGGGGATTGCATTAAGCTCTTGGTTCTCATTCCGGCTCTTTCCTCAAGCAAGAGGGTATGGGGACTTTCAAGATTTACTACTGATTGTGCCTCTAGTCATTGGAGATCCAGTTTAGGAACTATTTCAGATCAGAAAGAAGTTATTACAAACTCCTGTTCTCAATTAGTACTTCAACTCCATGATTTTTATGATCCAGAGAAGATAAAAATCAGAGTGAAGATTCTTTCTGGTTCTTTATGCGGAGCTGTTGCTGCTGAAGCCAAGAGAGTCCAGTCAAGCTGGGTTATATTGGACAAAAAATTGAAGCATGAAAAGAAATACTGCATGGAGCAGCTGCATTGCAATATTGTAATTATGAAGCGGTCTAGGCCAAAGATTCTGCGCTTGAATTTGAACAGTTCGTCTAAGATGGAGCTAAACATGGCTTGTCCATTGACACTTACAAGAAACATCAAAGACAACTCTGAACATGCAGCAGATATAATTAGAGGTCCAGCTGTTACTCCTGCTAGTAGTCCTGAGCAAGGGTCACCACTACTGACTGCAACTGATATTGGAACTTCATCCATATCAAGCTCAGATCCTGCAACTTCACCGTTTTTCCACCCTGGCATTTATGAAAGACAACAAAGGAGAGGTTTTAGCTTTGTTCACGAGGGACTGACAAACCTGGAGGATATCGAGTCTGACTCCGAGAGTGAAAAGCTAAGTATGTCATCCAAGAGCTCATATTTTCAGCCATGGATTGCAAATGTAATTTGCATGGATGGTGGTGATTTATCAAAACATGAAGACAACGTGCAAAAATCCAGTGACAAGACTTTAGCTACTGCCTATGAAGCTTTGCTTCAGAAATTCTCAAAGTTAGATCAAGACCCTATCCTAGGAATGCTTAATTGTAAACTTGATGTGAACTTGAGCAAAAGTGTTAGAGAAGCAATTTCATTAGCTAAAACTTCAGCTGCTGGACCTCCTCCATTGTGCTCCATTTGTCAGCACAAGGCACCCGTGTTTGGCAATCCACCAAAGTGGTTTACATTTTCCGAATTGCAACTTGCCACAGGTGGCTTTTCACAAGCAAACTTTTTGGCTGAAGGTGGTTTTGGTTCTGTACACCGCGGCGTCCTACCTGATGGGCAAGCACGGCCGTTGCTTGAAAAACAAGCGATTTATAAACTAGTAGACCCGAGCTTAAGGAACTGCTATGTTGATCAAGAGCTTTATCGCATGCTTCAATGTTCTTCTTTGTGCATTGGACGGGATCCTCATTTAAGGCCTCGAATGTCTCAGGTGCTCAGGATGCTCGAAGGTGACATTCTCATATGA 1467 0.4247 MSSQKGRHEEEMGTSEITGKVVVVAVKASRDISRTALVWALTHVVQPGDCIKLLVLIPALSSSKRVWGLSRFTTDCASSHWRSSLGTISDQKEVITNSCSQLVLQLHDFYDPEKIKIRVKILSGSLCGAVAAEAKRVQSSWVILDKKLKHEKKYCMEQLHCNIVIMKRSRPKILRLNLNSSSKMELNMACPLTLTRNIKDNSEHAADIIRGPAVTPASSPEQGSPLLTATDIGTSSISSSDPATSPFFHPGIYERQQRRGFSFVHEGLTNLEDIESDSESEKLSMSSKSSYFQPWIANVICMDGGDLSKHEDNVQKSSDKTLATAYEALLQKFSKLDQDPILGMLNCKLDVNLSKSVREAISLAKTSAAGPPPLCSICQHKAPVFGNPPKWFTFSELQLATGGFSQANFLAEGGFGSVHRGVLPDGQARPLLEKQAIYKLVDPSLRNCYVDQELYRMLQCSSLCIGRDPHLRPRMSQVLRMLEGDILI 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2419 488 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 17 427 - -
Aed5g2419 488 Gene3D Phosphorylase Kinase; domain 1 375 447 - -
Aed5g2419 488 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 428 488 - -
Aed5g2419 488 PANTHER OS01G0253100 PROTEIN 428 488 IPR045271 GO:0004714|GO:0006468
Aed5g2419 488 PANTHER OS01G0253100 PROTEIN 17 427 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2419 Aed-Chr5 25596043 25600125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2419 379 427 Trihelix Transcription Factor Family AT1G68690 51.020 4.06e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2419 - - gmx:100305413 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2419 5 25596043 25600125 Aed5g2419 5 25596043 25600125 ECH