Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2418 ATGGGAAGGAAGTGCTCGCATTGTGGAACCATAGGGCATAACTCAAGGACCTGCACATCTTTGAGAGGGACCAGTTTTGTTGGACTTCGCCTCTTCGGCGTGCAATTAGACAGCAGCAGTGTTAATGCTACGTTGATCAGAAAAAGTTTTAGCATGGAGTCTTTACCCTCTTCATCGACATCTTCCTCATTTTCTTCATCAAGAATAACCAATATTGATGATAACTCTTTTGGGTATCTCTCAGATGGTCTCTTAGGTCGACCCCAAGAGAGGAAGAAAGGAGTGCCATGGACAGAAGAGGAACACAGAATATTCCTTGTTGGACTTGAAAAGCTGGGAAAGGGTGACTGGAGGGGAATCTCTAGAAACTTTGTGACTACAAGAACCCCAACACAAGTGGCAAGCCATGCTCAAAAGTACTTTCTACGATTGGCAACTATTGATAAGAAGAAGCGACGTTCAAGTCTCTTTGACTTGGTTGGTAGCAACAAACCCAACAATGAAATAGCAGGTTCTAATTCAGTTATTTCGGCTGAGTCTAAATGCGAAGTTAAGAAGAATGATGCCACTTTGTCGTTGCTAGGGCGTATAACTTACTTTGATCAACAAGAAGAAACTAAATCAGAAATGATTGATCACAATTTGTCTCATCATCAAGTTCCTAATCTGGAGCTCACTCTTGCTGCTGCTGCTGCAGCCCCCCAGCTGCAGGAACAACAAAACAAATCATCCCCTTCTGCTCCATTTCTGATTGGCCCAATTACTGTGACTTAA 774 0.4302 MGRKCSHCGTIGHNSRTCTSLRGTSFVGLRLFGVQLDSSSVNATLIRKSFSMESLPSSSTSSSFSSSRITNIDDNSFGYLSDGLLGRPQERKKGVPWTEEEHRIFLVGLEKLGKGDWRGISRNFVTTRTPTQVASHAQKYFLRLATIDKKKRRSSLFDLVGSNKPNNEIAGSNSVISAESKCEVKKNDATLSLLGRITYFDQQEETKSEMIDHNLSHHQVPNLELTLAAAAAAPQLQEQQNKSSPSAPFLIGPITVT 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2418 257 CDD SANT 96 141 IPR001005 -
Aed5g2418 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 145 IPR017930 -
Aed5g2418 257 PANTHER TRANSCRIPTION FACTOR KUA1 1 190 - -
Aed5g2418 257 MobiDBLite consensus disorder prediction 234 250 - -
Aed5g2418 257 Pfam Myb-like DNA-binding domain 96 141 IPR001005 -
Aed5g2418 257 Gene3D - 95 147 - -
Aed5g2418 257 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 92 143 IPR006447 GO:0003677
Aed5g2418 257 SMART sant 93 143 IPR001005 -
Aed5g2418 257 ProSiteProfiles SANT domain profile. 97 145 IPR017884 -
Aed5g2418 257 ProSiteProfiles Myb-like domain profile. 89 141 IPR001005 -
Aed5g2418 257 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 1 190 - -
Aed5g2418 257 MobiDBLite consensus disorder prediction 234 257 - -
Aed5g2418 257 SUPERFAMILY Homeodomain-like 90 145 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2418 Aed-Chr5 25579706 25580795 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed5g2418 Myb_DNA-binding 2.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2418 - - gmx:778052 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2418 5 25579706 25580795 Aed5g2418 5 25579706 25580795 ECH