Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2404 ATGTCAAGGTTGATTCAAGAGAAGAAGCTGGGTGCAGGACGTGTTGTAGCAGTGGCAATTGAGAATAACAAAACAAGCCAATATGCAGCCAAATGGGCAGTTGATAATCTTCTTCCCAAAGAACAAATTCTCTTATTGCTCCATGTTAGACAAAAAGCATCTTCCATTCCTACGCCAACGGGAAACCTTATATCCCTTGATAGCAACGACGATGTGGCTAGAGCATACATGCAACAAATGGACAATGAATCTAAGGAGCTTTTCGCTTCATTTCGTGTCTTCTGCAATAGAAAGAATATACAATGCAAAGAAATCCTATTAGAGGACATGGATATAACAAAGGGATTAATAGAAGGAATTTCCAAATATTCCGTGGAGCTTTTGGTACTCGGGGCACCTTCAAGGAGTGGTCTTGTCAAAAGATTTAGGACATCTGATATTCCAAATGTGGTGTCCAAAGGGGCACCACCATTCTGCACCGTATACATTATTTCCAAAGGAAAAATCTCATCTGTGAAAACTGCAACTGCCCCAATAGCTGCTAAAGCTCCAATCCGTAACCCTACAATGCAGTCACAGCAACAGTCTCTCCAAACTCCTGATAGAATGGATACACGCAACAGCAACAGCACCAGCACCGTCCCACAACGATCAGCAATAGAGAAGTCATCATACATTATCCGCCAGGCACCATCAGATGATGACGACATCATGGCTTTACTGACAGGAGACATCTAA 738 0.4255 MSRLIQEKKLGAGRVVAVAIENNKTSQYAAKWAVDNLLPKEQILLLLHVRQKASSIPTPTGNLISLDSNDDVARAYMQQMDNESKELFASFRVFCNRKNIQCKEILLEDMDITKGLIEGISKYSVELLVLGAPSRSGLVKRFRTSDIPNVVSKGAPPFCTVYIISKGKISSVKTATAPIAAKAPIRNPTMQSQQQSLQTPDRMDTRNSNSTSTVPQRSAIEKSSYIIRQAPSDDDDIMALLTGDI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2404 245 MobiDBLite consensus disorder prediction 184 218 - -
Aed5g2404 245 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 153 - -
Aed5g2404 245 Pfam Universal stress protein family 14 146 IPR006016 -
Aed5g2404 245 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 238 - -
Aed5g2404 245 MobiDBLite consensus disorder prediction 186 218 - -
Aed5g2404 245 CDD STK_N 15 167 - -
Aed5g2404 245 Gene3D HUPs 14 164 IPR014729 -
Aed5g2404 245 PANTHER OS02G0152300 PROTEIN 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2404 Aed-Chr5 25455877 25459815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2404 7 234 Receptor kinase-like Gene Family AT1G78940 39.574 8.93e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2404 - - gmx:100803837 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2404 5 25455877 25459815 Aed5g2404 5 25455877 25459815 ECH
Aed5g2404 5 25455877 25459815 Aed7g0010 7 105995 109348 PCT