Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2403 ATGGCACTCAGAGGTTGGCATTTCTGCTGTATCTCACTTTTTTCTCTTCTCTTCATTCTCCCTTCTTCCTTCGGAGCTTCTGACTCTGAATTGCTCCTCAGAGTCAAGGACAACTTGCAAAACTACAACAATTCTCTCTCCTCATGGAACTCCTCGTTCCCTCCTTGCACCGGTGCCCATTCCAATTGGCATGGCATTCTTTGCTACGAAGGTAAAGTCTGGGGCGTCAGGCTCGAGAGAATGGGTCTCAAAGGTGTCATTGACGTTGACTCTCTCAGAGCCTTGCCTTATCTCAGAACCTTGAGTTTCATGCACAATCAACTCGAAGGTGCATGGCCTGAGTTTTACCACTTTGTCGGTCTCAAGTCTCTTTACCTTTCCGACAACAAATTCTCCGGTGAGATTCCTTACAATACTTTTGAGGGGATGAAGTGGCTCAAGAAGGTTCATTTGTCCAACAACCTCTTCACCGGTCCTGTTCCAACCTCGCTCGCTATTTTGCCCAGGCTCAGAGAGTTGAGATTGGATGGAAACAAATTCACCGGCCCCATTCCGCGCTTTCCCCGCCATAACAGATTGAAACTATTCAACATAACTGACAACGAGTTGAGTGGCGAGATTCCCGCCTCCATTAGGAGGATGCCGGTTTCTTCATTTTCCGCAGGGAACGAGAGGTTGTGTGGAGCGCCGTTGGAATCATGTTTTGCGAAGCCTTCGACTGCAAGCATTATTGTGGCTCTGGTGGTTGTTTGTGTGGCGGTGATAATGATTGCAGCAGTGATATGGTTCACACTTCGTAGAAGAAGAAAACAAGCAGCGTTAGCAAAGTTGATGGAGAATCCAGCCTCAAGGAGTAGCAAAGGAGGACATATGAGGGATGTGGGGAATGATAGCATCAGGTCGTCAAGGTCAATAAGCTCCACACACAGCAGAAGAAGAGGGGAGCAGATGAAAATGTCTTTTCTGAAAGATGATAGGGAGAGGTTTGATTTGCAAGAGTTGCTGAGAGCCTCTGCTGAGATCTTGGGAAGTGGTTGTTTCAGCTCTTCTTACAAGGCTGCTTTGATGACTGGCCCAACAATTGTGGTGAAAAGGTTCAAGCAAATGAACAATGTCGGGAAGGAAGAGTTTCAAGAACACATGAAAAGGATGGGGAGGTTGAGCCATCCTAACTTGCTTCCTCCTGTGGCTTACTACTACAGAAAGGAGGAGAAGCTCTTGATCACCGACTATGTTGAGAATGGAAGTCTTGCTGTTCGCCTTCATGGACACCAAGCCATTGGAGAACCAAGCCTTGATTGGCCAACCCGATTGAAGATTGTGAAAGGGATAGCAAAAGGTCTTGCATATCTATACAAGGACATGCCAAACCTAATTGCACCCCATGGAAATCTCAAGTCCTCTAATGTTCTATTGAGTGAATCTTTTGAGCCACTCCTCACAGACTATGGCTTAGTCCCAGTGATAAACCAGGAGCTGGCTCAGGACATCATGGCGATATACAAGTCTCCTGAGTATTTGCAACACGGAAGAATTACAAAGAAGACTGATGTGTGGTGTCTTGGAATACTAATTCTGGAGATTCTAACTGGGAAGTTCCCGGCTAACTTTGTGCAACAAGGTAAAGGGAGTGAGGTGAGTTTGGCAAGTTGGGTGCACTCAGTTGTCCCAGAAGAGTGGACAAATGATGTGTTTGATCAAGAAATGGGGGAAACAAATGATTGTGACGGAGAGATGGGAAAGCTTCTCAAGATTGCCTTGAATTGCTGTGAAGGGGATGTGGACAAGAGGTGGGATTTGAAGGAAGCAGTAGAGAAGATCCAGGAGGTGAAGCAGAGGGATTTTGATCAACAGGACTCTCTTACTTCTTAA 1872 0.4637 MALRGWHFCCISLFSLLFILPSSFGASDSELLLRVKDNLQNYNNSLSSWNSSFPPCTGAHSNWHGILCYEGKVWGVRLERMGLKGVIDVDSLRALPYLRTLSFMHNQLEGAWPEFYHFVGLKSLYLSDNKFSGEIPYNTFEGMKWLKKVHLSNNLFTGPVPTSLAILPRLRELRLDGNKFTGPIPRFPRHNRLKLFNITDNELSGEIPASIRRMPVSSFSAGNERLCGAPLESCFAKPSTASIIVALVVVCVAVIMIAAVIWFTLRRRRKQAALAKLMENPASRSSKGGHMRDVGNDSIRSSRSISSTHSRRRGEQMKMSFLKDDRERFDLQELLRASAEILGSGCFSSSYKAALMTGPTIVVKRFKQMNNVGKEEFQEHMKRMGRLSHPNLLPPVAYYYRKEEKLLITDYVENGSLAVRLHGHQAIGEPSLDWPTRLKIVKGIAKGLAYLYKDMPNLIAPHGNLKSSNVLLSESFEPLLTDYGLVPVINQELAQDIMAIYKSPEYLQHGRITKKTDVWCLGILILEILTGKFPANFVQQGKGSEVSLASWVHSVVPEEWTNDVFDQEMGETNDCDGEMGKLLKIALNCCEGDVDKRWDLKEAVEKIQEVKQRDFDQQDSLTS 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2403 623 Pfam Leucine rich repeat N-terminal domain 27 68 IPR013210 -
Aed5g2403 623 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 620 - -
Aed5g2403 623 Gene3D Transferase(Phosphotransferase) domain 1 412 622 - -
Aed5g2403 623 PANTHER LRR RECEPTOR-LIKE KINASE 11 620 - -
Aed5g2403 623 Pfam Leucine rich repeat 120 180 IPR001611 GO:0005515
Aed5g2403 623 ProSiteProfiles Protein kinase domain profile. 336 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2403 623 SUPERFAMILY Protein kinase-like (PK-like) 340 609 IPR011009 -
Aed5g2403 623 MobiDBLite consensus disorder prediction 280 318 - -
Aed5g2403 623 Gene3D Ribonuclease Inhibitor 27 142 IPR032675 -
Aed5g2403 623 Gene3D Ribonuclease Inhibitor 143 238 IPR032675 -
Aed5g2403 623 Gene3D Phosphorylase Kinase; domain 1 301 411 - -
Aed5g2403 623 Pfam Protein kinase domain 339 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2403 623 SUPERFAMILY L domain-like 27 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2403 Aed-Chr5 25452155 25454653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2403 16 619 Receptor kinase-like Gene Family AT5G35390 53.185 0.0 648
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed5g2403 Pkinase 7.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2403 - - gmx:100804368 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2403 5 25452155 25454653 Aed7g0009 7 96252 103829 PCT