Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2393 ATGGCTGAGGACTTTTCAATCATCACATGGCTCTCACTAACACTACTAATCACTGTAACAGCAACAAAAGGATCATCGGAGTACTGTGGCATGGCCGTGACGCCCTCAACCCCTCTCCTCTCCTTCCTCGAACAAGTCCAAGAAACAGCCTTCAACACCTTCGGCGCTTCCAACTTCGATCCAAAGACCTACGTCGACTTGCCTCTCAAGTACACCCTCCCGGTTACCGAGGACGCATTCCAGAAGCTTCTAAGGACCGGCAACGATGGTTCCGTGGCGGCTGAGGATTTAAAGTGTTTCATAGAAGCCTACTTTGAGGGTGCAGGGGATGATCTGGTGTATCTGGACCCACTGGATTTCGTTCCCGAGCCTGAGGGCTTCTTGCCCAAGGTGAAGCACCCTCAGGTCAGGGCCTGGGCCTTGCAGGTCCATTCCCTTTGGAAAACCTTGTCCCGGAAATTATCTGCTGAGGTGAAGGCACACCCGGACTTGCATACGCTGCTCCCTCTCCCTGCTGCGGCAGTCATTCCCGGCTCGCGTTTTCGCGAGGTTTATTACTGGGATTCCTATTGGGTTATTAGGGGCCTGCTCGCGAGTAAAATGCATCACACTGCTAAGGCTATTGTCACCAATCTCATTTCCTTGATAGAAGAATATGGCTTTGTTCTTAATGGTGCTAGAGCATACTACACTAACAGGAGCCAGCCTCCCCTTTTAAGCGCCATGATCTATGAGATATACAGTAGCACGGGTGATATGGAATTAGTTAAAAGATCTCTACCTGCCCTACTGAAAGAATATGAATTTTGGAATTCAGATATACATAAAGTGACCATCTTGGATGCTCAAGGTTGCACTCACACCTTAAATCGTTATCATGCAAGGTGGGACAAACCCAGGCCAGAATCATCCATAACGGACAAGGCATCTGCTTCCAACTTCTCGAGTGTTTCAGAAAAAAAACAGTTTTACCGTGAACTGGCATCAGCTGCTGAATCAGGATGGGATTTCAGCACCAGATGGATGAAAAACCCGCCTAATTTCACAACATTGGCTACAACATCTGTAATACCTGTTGATTTGAATGCATTTCTGCTCGGGATGGAACTTAATATTGCCTTATTTGCAAAAGTTACTGGAGATAATAGCACTGCTGAACGGTTCTTGGAAATTTCTGATCTTAGAAAGAAGGCAGTGAACTCTGTTTTCTGGAATGAAAACAAGAAACAATGGCTTGATTACTGGCTCAGCAGTTCATGTGAGGAGGGTCATGTTTGGAAAATCGAGCACCAGAATAAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGACATTTTACTCAGATACTTCACTTGTGAGTAGCGTTGTTGAAAGTCTCAAAACTTCTGGCCTGGTCCGTGGTGCTGGAATTGCAACTTCTTTGACTGATTCAGGACAACAGTGGGACTTTCCAAATGGGTGGGCACCGCTTCAACACATGCTAGTGGAAGGCCTGCTAAAATCAGGGTTGGAAGAAGCAAGGTCATTGGCAGAGGAAATTGCCATCAGATGGGTCACAACCAATTATGTTGTTTACAAGAAAACGGGTGTGATGCATGAAAAGTTTGACGTGGAGCATTGTGGAGAATTTGGAGGTGGGGGCGAATATGTACCCCAGACGGGTTTTGGCTGGTCAAATGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCTGAAGATCGGAACATTGAATGCTGA 1749 0.4637 MAEDFSIITWLSLTLLITVTATKGSSEYCGMAVTPSTPLLSFLEQVQETAFNTFGASNFDPKTYVDLPLKYTLPVTEDAFQKLLRTGNDGSVAAEDLKCFIEAYFEGAGDDLVYLDPLDFVPEPEGFLPKVKHPQVRAWALQVHSLWKTLSRKLSAEVKAHPDLHTLLPLPAAAVIPGSRFREVYYWDSYWVIRGLLASKMHHTAKAIVTNLISLIEEYGFVLNGARAYYTNRSQPPLLSAMIYEIYSSTGDMELVKRSLPALLKEYEFWNSDIHKVTILDAQGCTHTLNRYHARWDKPRPESSITDKASASNFSSVSEKKQFYRELASAAESGWDFSTRWMKNPPNFTTLATTSVIPVDLNAFLLGMELNIALFAKVTGDNSTAERFLEISDLRKKAVNSVFWNENKKQWLDYWLSSSCEEGHVWKIEHQNKNVFASNFVPLWMKTFYSDTSLVSSVVESLKTSGLVRGAGIATSLTDSGQQWDFPNGWAPLQHMLVEGLLKSGLEEARSLAEEIAIRWVTTNYVVYKKTGVMHEKFDVEHCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDRNIEC 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2393 582 PANTHER TREHALASE 26 582 IPR001661 GO:0004555|GO:0005991
Aed5g2393 582 Pfam Trehalase 58 573 IPR001661 GO:0004555|GO:0005991
Aed5g2393 582 Gene3D - 41 580 IPR012341 GO:0005975
Aed5g2393 582 PANTHER TREHALASE 26 582 - -
Aed5g2393 582 ProSitePatterns Trehalase signature 2. 483 492 IPR018232 GO:0004555|GO:0005991
Aed5g2393 582 PRINTS Glycosyl hydrolase family 37 signature 324 341 IPR001661 GO:0004555|GO:0005991
Aed5g2393 582 PRINTS Glycosyl hydrolase family 37 signature 356 373 IPR001661 GO:0004555|GO:0005991
Aed5g2393 582 PRINTS Glycosyl hydrolase family 37 signature 476 492 IPR001661 GO:0004555|GO:0005991
Aed5g2393 582 PRINTS Glycosyl hydrolase family 37 signature 219 237 IPR001661 GO:0004555|GO:0005991
Aed5g2393 582 PRINTS Glycosyl hydrolase family 37 signature 289 306 IPR001661 GO:0004555|GO:0005991
Aed5g2393 582 PRINTS Glycosyl hydrolase family 37 signature 399 415 IPR001661 GO:0004555|GO:0005991
Aed5g2393 582 PRINTS Glycosyl hydrolase family 37 signature 556 569 IPR001661 GO:0004555|GO:0005991
Aed5g2393 582 SUPERFAMILY Six-hairpin glycosidases 54 575 IPR008928 GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2393 33 582 Trehalose Biosynthesis Gene Families AT4G24040 59.675 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2393 K01194 - gmx:547539 1026.16