Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2377 ATGGACGATACCGAAACCAAAGAAAGAATCGAGGAAACTGTTCGAAAGATTTTGCAAGAATCGAACATGGACGAGGTTACTGAGTCCAAGATTCGAAAACTCGCCTCCGAACAACTTGGCCTCGACCTTTCTCAGACCCATTTCAAAGCCTTCGTCAAACAGGTCGTGAAGGCTTTTCTCCAAGAAAAACAACAAGAAGAACAACAACAACAGCAAGAAGAAGAAGAAGGAGAAGAACAACAGCAACAAGAAGAAGAAGAAGAACAAGGAGTTTCCCAGGGCAAGGAGTACGATGATGACGGCGATCTCATCATTTGCAGGATTTCAGATAAGAGAAGGGTGACGATTCAGGATTTCAGAGGGAAAACATTGGTCTCCATTCGGGAGTATTATAAAAAGGATGGCAAGGAGCTTCCTACTTCCAAAGGAATAAGTTTGACAGAAGATCAGTGGTCAGCCTTTAAGAAAAATGTGCCTGCCATAGAAAAAGCCATTAAGAAAATGGAGTCACGTTGA 516 0.4264 MDDTETKERIEETVRKILQESNMDEVTESKIRKLASEQLGLDLSQTHFKAFVKQVVKAFLQEKQQEEQQQQQEEEEGEEQQQQEEEEEQGVSQGKEYDDDGDLIICRISDKRRVTIQDFRGKTLVSIREYYKKDGKELPTSKGISLTEDQWSAFKKNVPAIEKAIKKMESR 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2377 171 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 4 171 - -
Aed5g2377 171 SUPERFAMILY DEK C-terminal domain 3 61 - -
Aed5g2377 171 Coils Coil 56 89 - -
Aed5g2377 171 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 171 IPR045125 GO:0003713|GO:0060261
Aed5g2377 171 Pfam DEK C terminal domain 5 60 IPR014876 -
Aed5g2377 171 MobiDBLite consensus disorder prediction 63 98 - -
Aed5g2377 171 Gene3D - 2 63 - -
Aed5g2377 171 Gene3D Transcriptional Coactivator Pc4; Chain A 94 171 IPR009044 GO:0003677|GO:0006355
Aed5g2377 171 PIRSF RNA_polymII_KELP 1 171 IPR017415 -
Aed5g2377 171 SUPERFAMILY ssDNA-binding transcriptional regulator domain 105 167 IPR009044 GO:0003677|GO:0006355
Aed5g2377 171 MobiDBLite consensus disorder prediction 69 86 - -
Aed5g2377 171 Pfam Transcriptional Coactivator p15 (PC4) 106 157 IPR003173 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2377 Aed-Chr5 25256589 25258790 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Aed5g2377 DEK_C 1.2e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2377 K25815 - gmx:100305633 247.284