Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2343 ATGGGCGCGGTGAAAATGCAGGTTAGTTTGTTGATCTTTGCGACGATTGGGTGCATGCTATTGGTATCTGTGAGTTCGATAACAACTCACGTTGTCGGAGACAACTTAGGTTGGAATTTGCCGAGTTACCCAGGGTTCTTCAATGACTGGGCCAGTAAAAGAACCTTCGCTGTTGGTGACGAGCTTCGTATGTTTTTGTTCTCAACACATGAGTCATGCATGAATGTATTCAAGTACAACCCAGGACTGAACACGGTGGTTCAAGTGGACAAGAACGACTTCGATCATTGCACAACCAGAAATATCTTCCACACATACTTCACAGGGAACTCATCTGCTACTTTGGACAAGCCTGGGGACTATTTTTTCTTCTCTTCCGTTGGCAAGCATTGCGAGTTTGGCCAAAAGCTTCATATTACTGTCCCTCAGGGACCCCACCAACATCTGCTAATTAATTAA 459 0.4488 MGAVKMQVSLLIFATIGCMLLVSVSSITTHVVGDNLGWNLPSYPGFFNDWASKRTFAVGDELRMFLFSTHESCMNVFKYNPGLNTVVQVDKNDFDHCTTRNIFHTYFTGNSSATLDKPGDYFFFSSVGKHCEFGQKLHITVPQGPHQHLLIN 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2343 152 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Aed5g2343 152 PANTHER BLUE COPPER PROTEIN 3 142 IPR039391 GO:0009055
Aed5g2343 152 Pfam Plastocyanin-like domain 40 135 IPR003245 GO:0009055
Aed5g2343 152 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 3 142 - -
Aed5g2343 152 SUPERFAMILY Cupredoxins 28 141 IPR008972 -
Aed5g2343 152 ProSiteProfiles Phytocyanin domain profile. 28 143 IPR003245 GO:0009055
Aed5g2343 152 Gene3D - 27 149 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2343 Aed-Chr5 25066045 25066816 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2343 10 141 Phytocyanin Superfamily AT4G31840 33.083 1.84e-18 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2343 - - gmx:102660389 209.149