Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2341 ATGGAATTTCTACCCATTTTCTCTTCCATTTCCCTGTTGCTGTGTTTGGTTCTGTGGCAAGGAAGTGCTGAACCTGTTGAAGATAAGGAGGCTTTGCTTGTCTTTGTGAACAAGTTCCCTCCTTCTAGGCCTCTGAATTGGAATGAGAGTTCCTCCATGTGTGATTCTTGGACTGGAGTGACTTGCAATGTAGACAAGTCCAAAGTAATAACAATTAGGTTGCCAGGGGTTGGATTTCATGGCAGTATTCCTCCTGATACTATTAGCCGCCTCTCAGCACTGCAAACCTTGAGCCTCAGATCCAATGTGATAACTGGGCATTTTCCTTCTGATTTTTCCAATCTGAAGAACTTGTCTTATCTCTATCTTCAGTTCAACAACTTGTCTGGTCCTTTGCCTGATTTCTCAACCTGGAAGAACCTCACTGTTGTCAATTTGTCCAATAACCATTTCAATGGCAGCATCCCTTCCTCCCTTAGCAACTTAACTCAGCTAGCTAGTTTGAACCTTGCAAACAACACTCTTTCTGGAGAAATTCCTGACCTCAACTTGTCAAGATTGCAGGTGCTCAATTTGTCCCACAACAACTTGCAGGGCAGTGTGCCTAAATCCCTGCTAAGGTTTCCTGAGTCTGCATTCTCTGGGAATAACATTTCCTTTGGAAGTTTTCCCACAGTTTCTCCGGCGCCTCAACCAGCTTATGAGCCGTCGTCTTTGAAGTCCAGGAAGCGTGGAAGGCTCAGCGAAGCCGCGCTGCTGGGAGTTATTGTTGCTGCTGCTATTTTAGGTATCGTGGCTTTTGGTTCTTTGATGATTGTGTGCTGCTCAAGAAGAGGTGATGAGGATGAGGAAACCTTCAGTGGGAAGTTGCACAAAGGGGAAATGTCTCCTGAGAAAGCTGTTTCAAGGAACCAGGATGCTAATAATAAACTGGTTTTCTTTGAGGGGTGTAATTATGCCTTTGATTTGGAGGATTTGTTGAGGGCTTCTGCTGAGGTGCTGGGAAAGGGAACGTTTGGAACTGCCTACAAGGCAATACTTGAGGATGCAACCACGGTTGTTGTGAAGAGGTTGAAGGAGGTAGCCGCTGGAAAGAAGGATTTTGAGCAACACATGGACATTGTAGGAAGTCTTAAGCATGAGAATGTGGTTGAGCTCAAGGCATATTATTATTCCAAAGATGAGAAACTCATGGTATATGATTACCACAGTCAGGGGAGCATCTCTTCCATGTTGCATGGCAAAAGAGGAGAGGATAGGGTGCCTTTAGATTGGGATACTCGGCTGAAAATAGCCTTAGGTGCTGCAAGAGGCATTGCCCGTATCCATGTTGAGAATGGTGGCAAGCTTGTACACGGAAACATAAAATCCTCGAACATCTTTCTCAACACCAAACAGTATGGCTGTGTGTCTGACCTTGGCCTGGCAACCATATCAAGCTCACTTGCCTTACCAATCTCACGAGCAGCCGGTTACCGTGCACCTGAAGTTATAGATACCAGAAAGGCAGGACAACCCTCAGATGTTTACAGCTTTGGTGTTGTGTTGCTAGAGCTTCTGACTGGGAAATCCCCTATCCACACAACTGGTGGTGATGAGATTATCCACCTTGTGAGGTGGGTTCATTCAGTTGTGCGTGAGGAGTGGACAGCTGAAGTGTTTGACTTGGAGCTGATGAGATATCCCAACATAGAAGAAGAGATGGTGGAAATGTTACAGATAGCCATGTCATGTGTGGTGAGGATGCATGATCAGAGGCCTAAGATGTCTGAAGTTGTGAAGATGATTGAAAATGTGAGGCAGATTGATTCAGGGACTCACTCATCAACTGGGAACCAAGCAGAACAACTTAAATTTTCTCAGCGTGACAATGACAATGGTAACTCTCCTTCCACTCCCTCCTACTTCCCAAGAGGAAGTGAATGA 1926 0.4538 MEFLPIFSSISLLLCLVLWQGSAEPVEDKEALLVFVNKFPPSRPLNWNESSSMCDSWTGVTCNVDKSKVITIRLPGVGFHGSIPPDTISRLSALQTLSLRSNVITGHFPSDFSNLKNLSYLYLQFNNLSGPLPDFSTWKNLTVVNLSNNHFNGSIPSSLSNLTQLASLNLANNTLSGEIPDLNLSRLQVLNLSHNNLQGSVPKSLLRFPESAFSGNNISFGSFPTVSPAPQPAYEPSSLKSRKRGRLSEAALLGVIVAAAILGIVAFGSLMIVCCSRRGDEDEETFSGKLHKGEMSPEKAVSRNQDANNKLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDATTVVVKRLKEVAAGKKDFEQHMDIVGSLKHENVVELKAYYYSKDEKLMVYDYHSQGSISSMLHGKRGEDRVPLDWDTRLKIALGAARGIARIHVENGGKLVHGNIKSSNIFLNTKQYGCVSDLGLATISSSLALPISRAAGYRAPEVIDTRKAGQPSDVYSFGVVLLELLTGKSPIHTTGGDEIIHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMSCVVRMHDQRPKMSEVVKMIENVRQIDSGTHSSTGNQAEQLKFSQRDNDNGNSPSTPSYFPRGSE 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2341 641 ProSiteProfiles Protein kinase domain profile. 328 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2341 641 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Aed5g2341 641 Pfam Protein kinase domain 331 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2341 641 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Aed5g2341 641 PANTHER OS05G0588300 PROTEIN 18 606 - -
Aed5g2341 641 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515
Aed5g2341 641 Pfam Leucine Rich Repeat 186 206 IPR001611 GO:0005515
Aed5g2341 641 Pfam Leucine rich repeat 82 128 IPR001611 GO:0005515
Aed5g2341 641 Gene3D Ribonuclease Inhibitor 137 228 IPR032675 -
Aed5g2341 641 PANTHER PROTEIN, PUTATIVE-RELATED 18 606 - -
Aed5g2341 641 Gene3D Phosphorylase Kinase; domain 1 294 402 - -
Aed5g2341 641 MobiDBLite consensus disorder prediction 603 641 - -
Aed5g2341 641 Gene3D Transferase(Phosphotransferase) domain 1 404 625 - -
Aed5g2341 641 SUPERFAMILY L domain-like 39 208 - -
Aed5g2341 641 ProSitePatterns Protein kinases ATP-binding region signature. 334 365 IPR017441 GO:0005524
Aed5g2341 641 SUPERFAMILY Protein kinase-like (PK-like) 332 596 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2341 Aed-Chr5 25050414 25054377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2341 17 599 Receptor kinase-like Gene Family AT4G23740 67.677 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aed5g2341 Pkinase 2.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2341 - - gmx:100804799 1145.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1762 11 21083873 21086467 Aed5g2341 5 25050414 25054377 PCT