Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2339 ATGAACGACGCAGATGTCTCAAAGCAAATCCAGCAGATGGTGAGGTTCATCCGCCAGGAAGCGGAGGAAAAAGCCAGTGAGATCTCTGTCTCCGCCGAAGAGGAATTCAATATCGAGAAGCTACAGTTGGTTGAAGCCGAAAAGAAGAAGATCAGGCAAGAGTACGAACGCAAAGAGCGCCAAGTCGAAATTCGCAAGAAGATTGAGTACTCAATGCAGTTGAATGCTTCCCGGATCAAAGTTCTTCAAGCTCAAGATGACGTGATCAGTTCCATGAAAGAAGCTGCATCCAAGGATCTGTTGAATGTGAGTCATCATCATCATTTGACTGTGAATCATCATGATCATGTGTACAGAAACCTTCTGAAAGATCTCATTGTTCAGTGCTTGCTAAGACTGAAAGAACCTTCTGTCTTATTGAGATGTCGGAAAGATGACCTGCAATTGGTAGAGCATGTGCTGGAATCAGTTGCACAGGAGTATGCTGAGAAATCAAATGTTGATCCCCCAGAGATCATTGTTGACAACCAAGTCTATCTTCCACCTGGACCCAGCCATCACAATTCTCATGATCCCTACTGCTCTGGTGGGGTGGTGTTGGCTTCTCATGATGGAAAGATTGTGTGTGAAAATACTCTCGATGCACGACTTGATGTAGTGTTCCGTAAAAAGCTTCCAGAGATCCGAAAGCAGCTCTTTGGACAAGTTATTGCTTGA 717 0.4463 MNDADVSKQIQQMVRFIRQEAEEKASEISVSAEEEFNIEKLQLVEAEKKKIRQEYERKERQVEIRKKIEYSMQLNASRIKVLQAQDDVISSMKEAASKDLLNVSHHHHLTVNHHDHVYRNLLKDLIVQCLLRLKEPSVLLRCRKDDLQLVEHVLESVAQEYAEKSNVDPPEIIVDNQVYLPPGPSHHNSHDPYCSGGVVLASHDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVIA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2339 238 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 238 IPR002842 GO:0033178|GO:0046961|GO:1902600
Aed5g2339 238 Coils Coil 38 61 - -
Aed5g2339 238 Hamap V-type proton ATPase subunit E [atpE]. 8 234 IPR002842 GO:0033178|GO:0046961|GO:1902600
Aed5g2339 238 Pfam ATP synthase (E/31 kDa) subunit 16 233 IPR002842 GO:0033178|GO:0046961|GO:1902600
Aed5g2339 238 Gene3D - 92 236 IPR038495 -
Aed5g2339 238 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 1 238 - -
Aed5g2339 238 Gene3D - 1 62 - -
Aed5g2339 238 SUPERFAMILY V-type ATPase subunit E-like 87 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2339 Aed-Chr5 25040301 25043265 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2339 1 238 Primary Pumps ATPases(2) AT4G11150 71.849 1.17e-122 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2339 K02150 - gmx:106794127 431.795