Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2332 ATGGGCAACTGCAGCAGCGGCGGAGGAGCCGCCACCACCACCACCTACTCCGAGGAACATCCCCGCCACAACGGCATCACGGTCCTCCCTCCGAACTCGAACCCTTCCCCCTCACTCCCCAAGCCCCCACAGTCGTCGTCGCTGGGCCGAGTACTGGGCCGGCCCATGGAGGATGTGCGGTCCATATACACATTCGGGCGGGAGCTGGGGCGCGGGCAGTTCGGCGTGACGTACCTGGTGACACACAAGACGACGAAGGAGCAGTTCGCGTGCAAGTCAATCGCGACGCGGAAGCTGGTGAACCGCGACGACATCGATGACATACGGCGTGAGGTCCAGATCATGCACCACCTCACCGGCCACCGCAACATCGTCGAGCTCAAGGGCGCCTACGAGGACCGCCACTCCGTCAACCTGGTCATGGAGCTCTGCGCCGGCGGCGAGCTCTTCGACCGGATCATCACCAAGGGCCACTACTCCGAGCGCGCCGCCGCCAACTCCTGCCGCCAGATCGTCACTGTCGTCCATAACTGCCACTCCATGGGCGTCATGCATAGGGATTTGAAGCCTGAGAATTTCTTGTTGCTCAGCAAGGACAATGATTCCCCTCTGAAAGCCACGGATTTTGGCCTCTCCGTCTTTTTTAAGCCAGGAGATGTGTTTAGAGACCTTGTTGGGAGTGCTTACTATGTTGCTCCTGAGGTGCTCAGAAGAAGTTATGGCCCTGAAGCTGATATTTGGAGTGCTGGAATTATATTGTACATTCTGCTTTCTGGTGTTCCCCCTTTCTGGGCAGAAAATGAACAGGGTATCTTTGATGCTATTCTTCGTGGCCATATTGATTTCGCATCAGATCCTTGGCCTTCCATATCAACTAGTGCCAAAGATCTTGTCAAGAAGATGCTACGCGCTGACCCTAAAGAACGCCTTTCAGCAGTTGAAGTACTTAATCATCCCTGGATGAGAGTGGATGGAGATGCATCTGATAAGCCTCTTGATATTGCTGTTTTAAGCAGAATGAAACAATTCCGGGCAATGAACAAGCTAAAAAAAGTAGCCCTAAAGGTTATTGCTGAAAATCTTTCTGAAGAAGAAATTATTGGCTTGAAGGAAATGTTCAAATCCATGGATACAGATAACAGTGGAACAATCACATTTGAAGAGTTGAAAGCTGGTCTCCCAAAACTGGGTAGTAAACTTTCTGAGTCTGAAGTAAGGCAGTTGATGGAAGCGGCTGATGTTGATGGAAACGGAACCATTGATTACATTGAATTTATAACTGCTACCATGCACATGAATAGAATGGAAAGAGAGGATCACCTATATAAAGCATTTGAATATTTTGACGATGATAAGAGCGGGTACATTACAATGGAAGAGTTGGAATCTGCCCTTAAGAAGTATAATATGGGTGATGAGAAAACAATAAAGGAGATCATTGCCGAAGTTGATACAGACAATGATGGAAGAATTAACTATGACGAGTTTGTAGCCATGATGAGGAAAGGCAACCCAGACATAACCCACATAACCCACAGACGTCGCAAATAA 1551 0.4939 MGNCSSGGGAATTTTYSEEHPRHNGITVLPPNSNPSPSLPKPPQSSSLGRVLGRPMEDVRSIYTFGRELGRGQFGVTYLVTHKTTKEQFACKSIATRKLVNRDDIDDIRREVQIMHHLTGHRNIVELKGAYEDRHSVNLVMELCAGGELFDRIITKGHYSERAAANSCRQIVTVVHNCHSMGVMHRDLKPENFLLLSKDNDSPLKATDFGLSVFFKPGDVFRDLVGSAYYVAPEVLRRSYGPEADIWSAGIILYILLSGVPPFWAENEQGIFDAILRGHIDFASDPWPSISTSAKDLVKKMLRADPKERLSAVEVLNHPWMRVDGDASDKPLDIAVLSRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGSKLSESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDDDKSGYITMEELESALKKYNMGDEKTIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDITHITHRRRK 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2332 516 ProSiteProfiles Protein kinase domain profile. 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2332 516 MobiDBLite consensus disorder prediction 1 52 - -
Aed5g2332 516 Gene3D - 329 505 - -
Aed5g2332 516 SUPERFAMILY Protein kinase-like (PK-like) 63 322 IPR011009 -
Aed5g2332 516 MobiDBLite consensus disorder prediction 1 32 - -
Aed5g2332 516 SUPERFAMILY EF-hand 360 501 IPR011992 -
Aed5g2332 516 Pfam EF-hand domain pair 369 429 IPR002048 GO:0005509
Aed5g2332 516 Pfam EF-hand domain pair 439 501 IPR002048 GO:0005509
Aed5g2332 516 SMART serkin_6 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2332 516 ProSitePatterns EF-hand calcium-binding domain. 484 496 IPR018247 -
Aed5g2332 516 ProSitePatterns EF-hand calcium-binding domain. 377 389 IPR018247 -
Aed5g2332 516 Pfam Protein kinase domain 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2332 516 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 15 26 507 - -
Aed5g2332 516 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Aed5g2332 516 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Aed5g2332 516 ProSiteProfiles EF-hand calcium-binding domain profile. 471 506 IPR002048 GO:0005509
Aed5g2332 516 Gene3D Phosphorylase Kinase; domain 1 65 148 - -
Aed5g2332 516 CDD STKc_CAMK 63 320 - -
Aed5g2332 516 ProSiteProfiles EF-hand calcium-binding domain profile. 436 470 IPR002048 GO:0005509
Aed5g2332 516 ProSitePatterns EF-hand calcium-binding domain. 413 425 IPR018247 -
Aed5g2332 516 SMART efh_1 475 503 IPR002048 GO:0005509
Aed5g2332 516 SMART efh_1 368 396 IPR002048 GO:0005509
Aed5g2332 516 SMART efh_1 440 468 IPR002048 GO:0005509
Aed5g2332 516 SMART efh_1 404 432 IPR002048 GO:0005509
Aed5g2332 516 ProSiteProfiles EF-hand calcium-binding domain profile. 400 435 IPR002048 GO:0005509
Aed5g2332 516 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 507 - -
Aed5g2332 516 ProSiteProfiles EF-hand calcium-binding domain profile. 364 399 IPR002048 GO:0005509
Aed5g2332 516 Gene3D Transferase(Phosphotransferase) domain 1 149 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2332 Aed-Chr5 24991325 24995729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2332 49 515 EF-hand Containing Proteins AT4G23650 80.514 0.0 813
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aed5g2332 Pkinase 1.5e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2332 K13412 - gmx:100777096 965.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1752 11 21031466 21035296 Aed5g2332 5 24991325 24995729 PCT