Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2328 ATGTGTGATAACAGTGAGCAAACAAGGGTTTTGCTGACAAGTGCGGCTTACGTCCATTTAAAGCATGCTGAGGTCTCTAAATATACACGCAATCTTGCTCCTGCAAGCCGGACTATTATGCTTTCAGGGCCAGCAGAACTTTACCAACAGATGCTTGCCAAGGCTTTAGCTCATTACTTTGAGGCCAAGTTGCTTCTGTTAGATTTAACTGACTTTTCATTGAAGATTCAGAGTAAATATGGTTCTTCCAACATGGAATCTTCTTTCAAAAGATCCCCTTCAGAGTCTACTATGGAGCGGCTATCTGATCTGTTCGGGTCATTTTCAATCTTTTCACAAAGAGAGGAGCCTAAAGGCAAAATGCACAGGCCTAGCAGTGGAGTGGACCTCCAATCAATGGGTCCGGAAGCATCTTGTAATCAGGCTCCAACACTCCGTAGAAATGCTTCTTCCACTTCAAATATAAGTGGCCTTGCTTCGCAAACCAATCCTACAAATTCAGCTCCTCTGAAGCGCACAAGCAGCTGGTCTTTTGACGAAAAGCTTCTTATACAGTCTCTTTATAAGGTTCTGGTTTTTGTGTCAAAAACCTATCCCATTGTGCTATATTTGCGGGATGTTGATAGGTTGTTATATAAATCACAAAGGATATATAACTTGTTCCAGAAAATGTTGAAGAAACTATCTGGACCGATTTTGATTCTTGGTTCGCGGGTTCTAGATTCGGGTAATGACTATATAGAGGTGGATGAGAAACTCAATTCACTCTTCCCATACAACATAGAAATCAGGCCCCCAGAAGATGAATCACATCTTGTCAGCTGGAAGTCTCAATTGGAAGAGGATATGAAGATGATACAAGTTCAGGATAACAAAAACCATATCATAGAAGTGCTTGCAGCCAATGATCTTGATTGTGATGACCTGGATTCCATTTGTGTCTCAGACACCATGGTTCTCAGTAACTATATAGAAGAGATTATTGTGTCGGCAATTTCTTACCATTTGATGAAAAACAAAGACCCTGAATACAGAAATGGAAAACTCATTATTTCTTCCAATAGTTTGTCCCGTGCATTGAGCATATTTCACAAGGGGAAATCCAGTACAAGTGATACAGCAAAACTAGAAGATCTAGCTGTGAAATCTGAGCAAAGAGAGGAAGCAAAGTCTGAAAATGCTGTTCCTGTAAAAAAGACTGAAGCAGGAATATCAACTAAAGTGGGAAAGGCTGATGGTGAAAAATCAGTTCCTGCATCCAAAGCCCCTGAAGTTCATCCTGATAATGAGTTTGAGAAGCGAATAAGGCCGGAGGTAATAGCAGCAAATGAGATTGGTGTGGCGTTCTCTGATATTGGAGCCTTAGATGAGACCAAAGAATCCCTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCGGACCTTTTCACCGGAGGCCTTCTAAAGCCTTGTAGAGGAATACTTCTGTTTGGACCTCCCGGCACTGGGAAGACTATGCTGGCAAAGGCCATTGCGAAGGAGGCCGGAGCAAGCTTCATCAATGTGTCCATGTCCACCATCACGTCTAAATGGTTTGGCGAAGACGAGAAGAATGTTCGTGCTTTATTCACACTTGCAAAAAAGGTCTCCCCAACTATAATATTCGTTGATGAGGTTGATAGCATGCTCGGCCAACGGACCAGAGTTGGTGAGCATGAAGCCATGAGGAAGATAAAGAATGAGTTTATGAGCCATTGGGATGGACTTTTGACAAAACAAGGGGAACGAATCCTTGTTCTTGCTGCAACCAATAGGCCTTTTGACTTGGATGAAGCTATTATTAGGCGATTTGAAAGAAGAATTATGGTAGGACTACCATCTGTGGAGAACAGGGAAAAGATTTTGAGGACTCTCCTGGCAAAAGAAAAGGTGGACAACGATCTTGATTTCAAGGAACTTGCAACTATGACAGAAGGATATACTGGAAGTGATCTAAAGAACTTGTGCACAACTGCTGCTTATCGGCCTGTTAGAGAGCTAATTCAGCAAGAGAGGCTAAAGAGTCTGGATAAAAAGCAGAAAGCTGAAAAGGGACAGAATGAAGATGATCAAGAAAGTGAAGGAGGACAATCAATAGAAGGAAATACTCAAGAAGATGCTGCTCAAGATGAAGATGATGAAGTTAAACAGGAAAGAGTTATTACCCTTAGGCCATTGAATATGCAGGATTTCAAAGAGGCCAAAAATCAGGTTGCTGCAAGCTTTGCAGCTGAAGGGGCTGGAATGGGTGAGTTGAAACAGTGGAACGAGTTGTACGGAGAAGGCGGTTCAAGGAAGCAGCAGCAGTTGTCTTACTTCCTGTGA 2343 0.423 MCDNSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTIMLSGPAELYQQMLAKALAHYFEAKLLLLDLTDFSLKIQSKYGSSNMESSFKRSPSESTMERLSDLFGSFSIFSQREEPKGKMHRPSSGVDLQSMGPEASCNQAPTLRRNASSTSNISGLASQTNPTNSAPLKRTSSWSFDEKLLIQSLYKVLVFVSKTYPIVLYLRDVDRLLYKSQRIYNLFQKMLKKLSGPILILGSRVLDSGNDYIEVDEKLNSLFPYNIEIRPPEDESHLVSWKSQLEEDMKMIQVQDNKNHIIEVLAANDLDCDDLDSICVSDTMVLSNYIEEIIVSAISYHLMKNKDPEYRNGKLIISSNSLSRALSIFHKGKSSTSDTAKLEDLAVKSEQREEAKSENAVPVKKTEAGISTKVGKADGEKSVPASKAPEVHPDNEFEKRIRPEVIAANEIGVAFSDIGALDETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAKKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLLTKQGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRTLLAKEKVDNDLDFKELATMTEGYTGSDLKNLCTTAAYRPVRELIQQERLKSLDKKQKAEKGQNEDDQESEGGQSIEGNTQEDAAQDEDDEVKQERVITLRPLNMQDFKEAKNQVAASFAAEGAGMGELKQWNELYGEGGSRKQQQLSYFL 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2328 780 Gene3D - 619 694 - -
Aed5g2328 780 ProSitePatterns AAA-protein family signature. 590 609 IPR003960 GO:0005524|GO:0016887
Aed5g2328 780 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 448 682 IPR027417 -
Aed5g2328 780 MobiDBLite consensus disorder prediction 115 170 - -
Aed5g2328 780 Gene3D - 446 618 IPR027417 -
Aed5g2328 780 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 5 780 - -
Aed5g2328 780 MobiDBLite consensus disorder prediction 681 722 - -
Aed5g2328 780 SMART AAA_5 483 620 IPR003593 -
Aed5g2328 780 Pfam AAA+ lid domain 640 678 IPR041569 -
Aed5g2328 780 MobiDBLite consensus disorder prediction 131 170 - -
Aed5g2328 780 MobiDBLite consensus disorder prediction 681 697 - -
Aed5g2328 780 CDD AAA 485 618 - -
Aed5g2328 780 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 5 780 - -
Aed5g2328 780 Pfam ATPase family associated with various cellular activities (AAA) 487 617 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2328 Aed-Chr5 24955369 24961052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2328 447 679 Calmodulin-binding Proteins AT3G56690 38.983 2.57e-44 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2328 - - gmx:100807464 1333.93