Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2319 ATGGAGGAATTTGGTCCTTGCTTGAGGGATTGGGATTTGGAAGCTATTGTGAGAGGAATCAGTACCAGCGGTGCTGAAGCCACGAGCACGATGGATAATAATCCTGAATTTTCTTATTTCTTCTCAGAACAAGATGAGGTACTTGATAGCTTTCCCGAATTCTCAGAAACCACGAGAGTCCTTGATGATTTAGAAGAGCTTTACAAACCTTTCTACCCGCACACTAGTACCATGGTTACAACTAATTCCCTACCAATTACTCCCTCGGAACCTCATCAACAAGTCAAATTAGCATCATCAGATCAAGATCAGAAAGTCCCCGCACCACCCAAATGTAAAAAAAGCAGTAGCAGTAGCAAGAAGAGGCAGAACAAGAGTGTGGTGAAGCAGGTGACAACAGCAGAAGGGCTTGATGATGCATGGGCATGGCGAAAATATGGACAGAAACCAATAAAGGGATCGCCGTATCCTCGAAGCTATTATAGATGCAGCAGTTCCAAAGGTTGTTTGGCGAGGAAACAGGTGGAAAGGAGCCACTTAGATCCTGCGGTGTTTCTTGTAACCTACACAGCCGAACACAGCCATCCCCACCCAACGCGAAGAAACTCTCTTGCTGGGACAACTAGGAAGAACAATTCCCTCCTTCCTCCCACGACAACAACAACAACAACATCAACAATAACAACTCCTAATTTGCTGCAACAAACCACCATGGAGTTTAAGAAAGAGGCCGAGGAGGATCATGAACATTTTCTTGACTGGTTGGATGATGAGATTAATGGTTGGAATAATATTCCAAACTCAGATATTGACAAACTCATAGGACTTGACTGCCAACATTTTGCAGCATTAGATCATCATCATTTTATTCCACACCCTTAG 882 0.4376 MEEFGPCLRDWDLEAIVRGISTSGAEATSTMDNNPEFSYFFSEQDEVLDSFPEFSETTRVLDDLEELYKPFYPHTSTMVTTNSLPITPSEPHQQVKLASSDQDQKVPAPPKCKKSSSSSKKRQNKSVVKQVTTAEGLDDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPAVFLVTYTAEHSHPHPTRRNSLAGTTRKNNSLLPPTTTTTTTSTITTPNLLQQTTMEFKKEAEEDHEHFLDWLDDEINGWNNIPNSDIDKLIGLDCQHFAALDHHHFIPHP 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2319 293 Gene3D WRKY domain 121 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed5g2319 293 ProSiteProfiles WRKY domain profile. 132 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed5g2319 293 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 10 254 IPR044810 GO:0003700
Aed5g2319 293 MobiDBLite consensus disorder prediction 193 225 - -
Aed5g2319 293 MobiDBLite consensus disorder prediction 82 131 - -
Aed5g2319 293 Pfam WRKY DNA -binding domain 138 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed5g2319 293 MobiDBLite consensus disorder prediction 200 225 - -
Aed5g2319 293 SUPERFAMILY WRKY DNA-binding domain 131 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed5g2319 293 SMART WRKY_cls 137 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed5g2319 293 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 10 254 - -
Aed5g2319 293 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2319 Aed-Chr5 24882567 24884087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2319 8 229 WRKY Transcription Factor Family AT4G23550 47.807 1.03e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed5g2319 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2319 K13426 - gmx:102663255 355.525