Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed5g2319 | ATGGAGGAATTTGGTCCTTGCTTGAGGGATTGGGATTTGGAAGCTATTGTGAGAGGAATCAGTACCAGCGGTGCTGAAGCCACGAGCACGATGGATAATAATCCTGAATTTTCTTATTTCTTCTCAGAACAAGATGAGGTACTTGATAGCTTTCCCGAATTCTCAGAAACCACGAGAGTCCTTGATGATTTAGAAGAGCTTTACAAACCTTTCTACCCGCACACTAGTACCATGGTTACAACTAATTCCCTACCAATTACTCCCTCGGAACCTCATCAACAAGTCAAATTAGCATCATCAGATCAAGATCAGAAAGTCCCCGCACCACCCAAATGTAAAAAAAGCAGTAGCAGTAGCAAGAAGAGGCAGAACAAGAGTGTGGTGAAGCAGGTGACAACAGCAGAAGGGCTTGATGATGCATGGGCATGGCGAAAATATGGACAGAAACCAATAAAGGGATCGCCGTATCCTCGAAGCTATTATAGATGCAGCAGTTCCAAAGGTTGTTTGGCGAGGAAACAGGTGGAAAGGAGCCACTTAGATCCTGCGGTGTTTCTTGTAACCTACACAGCCGAACACAGCCATCCCCACCCAACGCGAAGAAACTCTCTTGCTGGGACAACTAGGAAGAACAATTCCCTCCTTCCTCCCACGACAACAACAACAACAACATCAACAATAACAACTCCTAATTTGCTGCAACAAACCACCATGGAGTTTAAGAAAGAGGCCGAGGAGGATCATGAACATTTTCTTGACTGGTTGGATGATGAGATTAATGGTTGGAATAATATTCCAAACTCAGATATTGACAAACTCATAGGACTTGACTGCCAACATTTTGCAGCATTAGATCATCATCATTTTATTCCACACCCTTAG | 882 | 0.4376 | MEEFGPCLRDWDLEAIVRGISTSGAEATSTMDNNPEFSYFFSEQDEVLDSFPEFSETTRVLDDLEELYKPFYPHTSTMVTTNSLPITPSEPHQQVKLASSDQDQKVPAPPKCKKSSSSSKKRQNKSVVKQVTTAEGLDDAWAWRKYGQKPIKGSPYPRSYYRCSSSKGCLARKQVERSHLDPAVFLVTYTAEHSHPHPTRRNSLAGTTRKNNSLLPPTTTTTTTSTITTPNLLQQTTMEFKKEAEEDHEHFLDWLDDEINGWNNIPNSDIDKLIGLDCQHFAALDHHHFIPHP | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed5g2319 | 293 | Gene3D | WRKY domain | 121 | 199 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g2319 | 293 | ProSiteProfiles | WRKY domain profile. | 132 | 198 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g2319 | 293 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 10 | 254 | IPR044810 | GO:0003700 | |
Aed5g2319 | 293 | MobiDBLite | consensus disorder prediction | 193 | 225 | - | - | |
Aed5g2319 | 293 | MobiDBLite | consensus disorder prediction | 82 | 131 | - | - | |
Aed5g2319 | 293 | Pfam | WRKY DNA -binding domain | 138 | 196 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g2319 | 293 | MobiDBLite | consensus disorder prediction | 200 | 225 | - | - | |
Aed5g2319 | 293 | SUPERFAMILY | WRKY DNA-binding domain | 131 | 198 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g2319 | 293 | SMART | WRKY_cls | 137 | 197 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Aed5g2319 | 293 | PANTHER | WRKY TRANSCRIPTION FACTOR 63-RELATED | 10 | 254 | - | - | |
Aed5g2319 | 293 | MobiDBLite | consensus disorder prediction | 82 | 101 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed5g2319 | Aed-Chr5 | 24882567 | 24884087 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed5g2319 | 8 | 229 | WRKY Transcription Factor Family | AT4G23550 | 47.807 | 1.03e-51 | 170 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Aed5g2319 | WRKY | 2.6e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed5g2319 | K13426 | - | gmx:102663255 | 355.525 |