Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2311 ATGATCATTCCGGAGAAGAACCGTAAGGAGATCTGCAAATACCTCTTTCAAGAGGGAGTTTGCTTTGCGAAGAAGGACTTCAATTTGGCGAAGCACCCTGAGATTGACGTGCCGAATCTGCAGGTGATCAAGCTGATGCAGAGTTTCAAGTCTCGCGAGTACGTGAGGGAGACTTTTGCTTGGATGCACTATTACTGGTTCCTCACCAACGATGGCATCGAGTTTCTTAGAACTTACCTTAACCTTCCTTCCGAAATTGTCCCTGCTACTTTGAAGAAACAGGCCAAGCCACCTGGCAGGCCCTTTGGTGGCCCATCCGGTGATCGCCCTAGGGGTCCACCACGATTTGAAGGGGGGGAGCGTAGGTTTGGTGGTGATCGTGATGGATACCGTGGAGGCCCTCGTGGACCTGGTGGTGACTTTGGAGGAGGAGACAAGGGAGGGGCTCCTGCTGACTACAGGCCCTCTTTTGGGGGTCCTGGCGGAAGGCCTGGCTTTGGTCGTGGATCTGGTGGTTTTGGAGCTCCAACCAGCTCAAATCTTCCCTAA 549 0.5319 MIIPEKNRKEICKYLFQEGVCFAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPPGRPFGGPSGDRPRGPPRFEGGERRFGGDRDGYRGGPRGPGGDFGGGDKGGAPADYRPSFGGPGGRPGFGRGSGGFGAPTSSNLP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2311 182 MobiDBLite consensus disorder prediction 91 182 - -
Aed5g2311 182 PANTHER 40S RIBOSOMAL PROTEIN S10 1 181 IPR037447 -
Aed5g2311 182 Gene3D - 1 104 IPR036388 -
Aed5g2311 182 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 181 - -
Aed5g2311 182 Pfam Plectin/S10 domain 3 94 IPR005326 -
Aed5g2311 182 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2311 Aed-Chr5 24838729 24840733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2311 1 182 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 76.923 2.15e-78 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2311 K02947 K09422 gmx:100500445 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1736 11 20931869 20933461 Aed5g2311 5 24838729 24840733 PCT