Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2305 ATGGCAGCGGCAACTACAACAACTCTACTCAAACTTCAAAACCAGCCCAACAACAACAACAACAACACTAAGCCCAAACGACGCAAGTATCGTGAAACTACCATCTCCGCCTCCGCCTCTCCGCATCGCCGCCCTCCCGATTCCCCTTTATGCCCCCAACCCGAACCCGAACCCGAACCCGCATTGCCCGAATCTCCCTCGACGTACAGGATCCGGTTCTCCCCAGGGCGGTTCTCTCCGATAATGGACTTCACTCACACTTCTCCCACTTCGAACGGTCACACCCACACCCACACCCAGAGCCAGGACCCCTTCCCTTCTAGCTTCTCAAAGTTCAACTCCGCTCTCACCGCGGGCCTCTTAAACCCAATGTCCCCCCCGCCCGACAAGACCCGATCCAGCCCAACCCTCTTTGAAATGATGGCCAGTGAGCCCGACATCCACCACAGGCCCACCGCCCAGATCCCCCCCAACACCAATGCCGCCACCGTCCACAAACCCCAAATTCTGGATCGGCAGGCCCTCATGATGCAGCGCATTTCCGAGCTCTTAGGGTCTCGAAGCCCCGGGAACCAGTTCAACGACGCCGTTTCCAGCGACATCAAGCTCACTCTCAGCTCCAAAGACGGTATTACTGTCTCCATGAGCGTGCATCGCCAAATCCTCGTTGCTCACAGTAGGTTCTTCTCTGTCAAGCTCTCCGATCGTTGGACCAAGCAGCAGCAACAGCAGCAACAGCGCTCCCCGGTGCCCTACGAAGTTGAAATCGCCGATTGCGACGATGTTGAGGTTTATATCGAGACCTTGAGGTTGATGTATTGTAAGGATCTTAGGAAGAAGCTCATGAGGGAGGATGTCCCTAGAGTACTTGGTATCTTAAAGGTTTCAGCTGCGATTGGGTTTGATGCTGGGGTTTTGTCTTGTTTGGAGTACTTGGAAGCAGCGCCATGGGCCGAGGATGAGGAGGAGAAGGTGGCATCCCTCCTGTCTGAGCTTCGTCTTGAATCAGTTGGAGCTGGGGAGGTTTTGAAGAGGGTTTCAACAGATGTTGCCAATGGAAATGAAGAGGGGACTGATAACGAGGAGGTTCTTCTCAAGCTTATTCGTGTGGTTCTTGAAGGGAAGGATGAGAAGGCCAGGCGTGAGATGAAAGGGTTAGTGTCAAAGATGCTGCGTGAGAATTCTTCTCAGAATGATCTTCGGAAGGAGTCGTTGTACTTGGCATGTGATGACTGTCTACAGTTACTTCGTCACCACTTTTTGCAGGCTGCAGCTTCGGACCTGCAGGATGTGAGTCAAATTGCACGACAAGCAGATAATTTGCATTGGATTTTGGATATTTTAATTGACAGACAGATTGCCGAGGATTTCCTGAAGACATGGGCATCTCAGTCAGATTTAGCGGAAGCTCATTCTAAAGTTCCAGCAGTTCACAGGTTTGAGGTTAGCAGAGTTACAGCGAGGTTGTTTGTTGGGATTGGGAAAGGACAATTGTTGGCTTCTAAAGATGTCAGGTGTTTGCTTCTTAAAACATGGCTGGTGCCCTTTTATGATGACTTTGGTTGGATGAGGAGGGCATCCAAGGGCCTTGATAGGCACCTAATTGAGGATGGTCTTAGTAACACGATTCTCACTCTGCCACTCTCCTGGCAACAGGATATTTTGCTTGCTTGGTTTAATCGTTTCTTGAATTCTGGTGAAGATTGCCCAAATATTCAAAGAGGGTTTGAAGTTTGGTGGAGAAGGGCTTTTTGGAAGAGGAATGGAGAGCAAGAACGGACAAGACAATTACGAATTACAACTACATCAGTTGAGAACCCTTGA 1824 0.5044 MAAATTTTLLKLQNQPNNNNNNTKPKRRKYRETTISASASPHRRPPDSPLCPQPEPEPEPALPESPSTYRIRFSPGRFSPIMDFTHTSPTSNGHTHTHTQSQDPFPSSFSKFNSALTAGLLNPMSPPPDKTRSSPTLFEMMASEPDIHHRPTAQIPPNTNAATVHKPQILDRQALMMQRISELLGSRSPGNQFNDAVSSDIKLTLSSKDGITVSMSVHRQILVAHSRFFSVKLSDRWTKQQQQQQQRSPVPYEVEIADCDDVEVYIETLRLMYCKDLRKKLMREDVPRVLGILKVSAAIGFDAGVLSCLEYLEAAPWAEDEEEKVASLLSELRLESVGAGEVLKRVSTDVANGNEEGTDNEEVLLKLIRVVLEGKDEKARREMKGLVSKMLRENSSQNDLRKESLYLACDDCLQLLRHHFLQAAASDLQDVSQIARQADNLHWILDILIDRQIAEDFLKTWASQSDLAEAHSKVPAVHRFEVSRVTARLFVGIGKGQLLASKDVRCLLLKTWLVPFYDDFGWMRRASKGLDRHLIEDGLSNTILTLPLSWQQDILLAWFNRFLNSGEDCPNIQRGFEVWWRRAFWKRNGEQERTRQLRITTTSVENP 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2305 607 MobiDBLite consensus disorder prediction 81 105 - -
Aed5g2305 607 MobiDBLite consensus disorder prediction 45 63 - -
Aed5g2305 607 MobiDBLite consensus disorder prediction 1 105 - -
Aed5g2305 607 ProSiteProfiles BTB domain profile. 199 281 IPR000210 GO:0005515
Aed5g2305 607 Pfam BTB/POZ domain 193 290 IPR000210 GO:0005515
Aed5g2305 607 PANTHER OSJNBA0011J08.25 PROTEIN 23 605 - -
Aed5g2305 607 MobiDBLite consensus disorder prediction 1 23 - -
Aed5g2305 607 Gene3D Potassium Channel Kv1.1; Chain A 176 315 IPR011333 -
Aed5g2305 607 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 23 605 IPR038920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2305 Aed-Chr5 24789968 24793871 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aed5g2305 BTB 0.00016 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2305 - - ccaj:109800730 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2305 5 24789968 24793871 Aed10g0656 10 5314663 5316978 PCT