Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2291 ATGCGGTTTTGGTGGGGAAAGTCTTCTTCCAAAGAGGCAAAGAGGAAAGCAAACAGGGAAAGTATTATTGATACAATACAGCGGAAATTAAAGAATACTTATGAAGAGAAGTGCAATAATAAATCAGGAAGATCAAGGAGACATCATGATGATGCTATATCTAAGAAGGGATCTAGATCTCTAGCACCTTCAAGATCACCATCACCCTCACCCTCAGCACAAGTGTTCCGCTCTCAAAGTTTTACAGAAAATCCTCCTTCTCAACCACTCCCATTACCAGGGTCACATCTTCCAGCTGCCATTGATGCAACTTCTGGAGTTATTTTAACATCAAAACTGGAACGAGCCATAGGCTCCAAGTCATCTCTATATATTCCTCTTCCTCCAAAACCTGGTTATGTATCAAACAAGGAAGATCCTACAGATGCAGAAGGAGATATAGCCACTGCATCTGTTTCTAGTGACAGCTCAATTGATAGTGGCAACTCATTTGATTCACAGCATCTTATTAGTCCTCTGGCATCTGACTGTGAAAATGAAAACCAAGCCACCATTGTTAGTTCTTTCAGTGTGGCGCACAAGAATCAATCTCTCATTACTATCCAAAGAAATTCAAGAGCATCCTCGAAACCAGCTCCTCAGTTGTGCAATAATAAGCCTTTATCTACCTCACCAAGAGGGTTTCCTTTACATATGCAAAATCTGCAAATAGCTCGACCAGGTGGTTTGTGTAGTGCTCCAGATAGTTCAATGTCAAGTCCTTCAAAAAGTCCAATGGGAGCATTTGGTCCTGAGCAAATGTTGAACTCTGAATTACGAACAGGAAAGTCTTATCCAGATATAGCTTCTGGGCACTGCTATAATTCTGGTCATAATTCAGTTGGGGATATTTCAGGACAGATGATTTTGCCACAGAACAGGTGTAGCCCTGAGTGTTCTCCAATAGCTAGTCCCAGAATTAGAAGCCCCGGTCCCAGTTCCAGAATACAGAGTGGTACTGTGACCCCTCTACATCCTAAAGCTGGAGGTGCTGCAACAGAAGCACATACAAGACGTCCTGACGATGTGAAACAAAAGAAATGTCAGTTAGCAATTCCTCCAATAACAGTCACTAAGTCTTGTCCGTTTTCTCCAACCTATTCTGCATCCACAACTCCTTCAGCCCCTCGTAGTCCTGCTAGATCAGAAAATTTGGCAAGCCCAGGTTCACGCTGGAAAAAGGGGCAGTTGCTTGGAAGGGGAACATTTGGACATGTATATCTTGGTTTTAACAGAGAAAGTGGTGAGATGTGTGCAATGAAGGAGGTAACCCTTTTTTCAGATGATGCCAAATCAAGGGAAAGTGCGCAGCAACTTGGCCAAGAAATTGTCGTGCTTAGTCAGTTGCGGCATCCAAATATTGTTCAGTATTATGGATCTGAGACGGTAGATGACAAACTTTATGTGTACTTGGAGTATGTCTCTGGTGGGTCAATCTATAAGCTGGTTAAAGAATATGGCCAGTTAGGTGAAATTGCTATTCGTAATTATACTCGGCAAATTCTGTCAGGACTTGCATATTTGCACACTAAGAACACTGTTCACAGGGACATTAAAGGAGCAAACATACTGGCGGACCCTAGTGGTCGGATAAAATTGGCAGATTTTGGGATGGCAAAGCATATAAGCGGGTCATCTTGTCCTTTTTCTTTCAAAGGAAGTCCTTACTGGATGGCACCTGAGGTTGTAAACAATTCAAATGGTTGTAATCTTGCGGTTGATATATGGAGTCTAGGATGCACTGTCTTGGAGATGGCGACAACAAAACCTCCTTGGAGTCAATATGAAGGGGTGGCTGCTTTGTTTAAGATTGGGAATAGCAAGGAACTTCCTACAATTCCAGATCATCTATCAGAAGATGGAAAAGACTTTGTCAGGCTTTGTTTGCAAAGGAATCCTCTAAATCGTCCCTCAGCTGCTCAACTTCTAGAGCATCCATTTGTTAAAAATGCTATGCTGGAAAGATCCATTTTAACTGCAGTTCCTTCAGAAGATCCAACTGCCATAATAAATGCAGTGAGATCTCTGGCCATTGGACCTGCAAAACATAATTTATGCTTAGACTCAGAAGTGGCTGGGATCTATCCACTTAGAAGCTTGAGAACTGGTTCTGGATCAAGCAATGCTCATACACCAAGGAACATCTCTTGTCCCATTTCTCCCTCTATGCCTTATAAATCATTGCATACAAGTGGAAGGATGTCTCCTCCAATATCCAGCCCTCATGATGCATCTGGCTCATCTTCGCCACTAACCAGTGGTGGTGGTGCTATTCCATTTCATCAGACAAAGCAACCAATATTCTCACATGAAGTTTTGGGTATGATCCAAAAGTCTCAGAATGGTGCTATTCCAATATCTCGCCCTCGTATTGTGTCTGGCTCATCTTCACCCCTAACCAATGGTGGTGGTGCTATTCCATTTCATCAGACAAAGCAACCAATATTCTCACATGAAGTTTTGGGTATGATCCCAAAGTCTCAGAATGGTGCTATTCCAATATTTAGCCCTAGTACTGCGTCTGGCTCATCGTCACCCCTAACCAATGGCGGTGGTGCTATTCCATTTCATCAAACAAAGCAACCACTATTGTCACATGAAGTTATGGGTATGATCCAAAAGTCTCAGAACGGTGCTATTCCAACATGTAGCCCTCGTACTGCATCTGGCTCATCTTCGCCACTAACCAGTGGTGGTGGTTCTATTCCATTTCATCAGACAAAGCAACCACTATTTTCACATGAAGTTGTGAGTATGATCCAAAAGTCTCAGAATGGTGCTATTCCAATATCTAGCCCTTGTACTGCATTTGGCTCATCTTCGCCACTAACCAGTGGTGGTGGTGCTATTCCATTTCATCTAACAAAGCAACCACCATTCTCACATGAAGTTGTGGGTATGATCCAACAGTCTCAGAATGGTTTTTATTCAAATGGAAATACTGCTTATCAGGGGTCTAAGCATGAGAAGTTTGGGAGAAACTTGCAAACTTCACATGCTTACCGGGATGTATTTTCATCTGATAATGATGCTCTTCCAAACCATACTAGGAGGGCTGTCCAGGGAGACCTAATAGAATTTCGTGATGAGAAGAGATACTTGGCTGATTGTGTGTCCCAACAGCTCTTGAGGGATTATGTACGGGTAAATGCATGCCTGGATAATAAGCCTGATGTCCCAAATCCTTGTCGCACTAATGGCTTATGA 3246 0.427 MRFWWGKSSSKEAKRKANRESIIDTIQRKLKNTYEEKCNNKSGRSRRHHDDAISKKGSRSLAPSRSPSPSPSAQVFRSQSFTENPPSQPLPLPGSHLPAAIDATSGVILTSKLERAIGSKSSLYIPLPPKPGYVSNKEDPTDAEGDIATASVSSDSSIDSGNSFDSQHLISPLASDCENENQATIVSSFSVAHKNQSLITIQRNSRASSKPAPQLCNNKPLSTSPRGFPLHMQNLQIARPGGLCSAPDSSMSSPSKSPMGAFGPEQMLNSELRTGKSYPDIASGHCYNSGHNSVGDISGQMILPQNRCSPECSPIASPRIRSPGPSSRIQSGTVTPLHPKAGGAATEAHTRRPDDVKQKKCQLAIPPITVTKSCPFSPTYSASTTPSAPRSPARSENLASPGSRWKKGQLLGRGTFGHVYLGFNRESGEMCAMKEVTLFSDDAKSRESAQQLGQEIVVLSQLRHPNIVQYYGSETVDDKLYVYLEYVSGGSIYKLVKEYGQLGEIAIRNYTRQILSGLAYLHTKNTVHRDIKGANILADPSGRIKLADFGMAKHISGSSCPFSFKGSPYWMAPEVVNNSNGCNLAVDIWSLGCTVLEMATTKPPWSQYEGVAALFKIGNSKELPTIPDHLSEDGKDFVRLCLQRNPLNRPSAAQLLEHPFVKNAMLERSILTAVPSEDPTAIINAVRSLAIGPAKHNLCLDSEVAGIYPLRSLRTGSGSSNAHTPRNISCPISPSMPYKSLHTSGRMSPPISSPHDASGSSSPLTSGGGAIPFHQTKQPIFSHEVLGMIQKSQNGAIPISRPRIVSGSSSPLTNGGGAIPFHQTKQPIFSHEVLGMIPKSQNGAIPIFSPSTASGSSSPLTNGGGAIPFHQTKQPLLSHEVMGMIQKSQNGAIPTCSPRTASGSSSPLTSGGGSIPFHQTKQPLFSHEVVSMIQKSQNGAIPISSPCTAFGSSSPLTSGGGAIPFHLTKQPPFSHEVVGMIQQSQNGFYSNGNTAYQGSKHEKFGRNLQTSHAYRDVFSSDNDALPNHTRRAVQGDLIEFRDEKRYLADCVSQQLLRDYVRVNACLDNKPDVPNPCRTNGL 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2291 1081 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 784 - -
Aed5g2291 1081 MobiDBLite consensus disorder prediction 32 56 - -
Aed5g2291 1081 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 796 832 - -
Aed5g2291 1081 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 892 927 - -
Aed5g2291 1081 ProSitePatterns Protein kinases ATP-binding region signature. 411 434 IPR017441 GO:0005524
Aed5g2291 1081 MobiDBLite consensus disorder prediction 379 398 - -
Aed5g2291 1081 MobiDBLite consensus disorder prediction 1 20 - -
Aed5g2291 1081 MobiDBLite consensus disorder prediction 32 97 - -
Aed5g2291 1081 MobiDBLite consensus disorder prediction 317 359 - -
Aed5g2291 1081 MobiDBLite consensus disorder prediction 890 919 - -
Aed5g2291 1081 MobiDBLite consensus disorder prediction 379 406 - -
Aed5g2291 1081 CDD STKc_MEKK1_plant 404 661 - -
Aed5g2291 1081 Pfam Protein kinase domain 406 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2291 1081 SMART serkin_6 405 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2291 1081 SUPERFAMILY Protein kinase-like (PK-like) 403 744 IPR011009 -
Aed5g2291 1081 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 939 993 - -
Aed5g2291 1081 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 784 - -
Aed5g2291 1081 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 892 927 - -
Aed5g2291 1081 MobiDBLite consensus disorder prediction 345 359 - -
Aed5g2291 1081 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 939 993 - -
Aed5g2291 1081 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 845 880 - -
Aed5g2291 1081 MobiDBLite consensus disorder prediction 147 164 - -
Aed5g2291 1081 MobiDBLite consensus disorder prediction 59 85 - -
Aed5g2291 1081 MobiDBLite consensus disorder prediction 714 773 - -
Aed5g2291 1081 ProSiteProfiles Protein kinase domain profile. 405 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed5g2291 1081 Gene3D Transferase(Phosphotransferase) domain 1 403 685 - -
Aed5g2291 1081 MobiDBLite consensus disorder prediction 130 164 - -
Aed5g2291 1081 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 796 832 - -
Aed5g2291 1081 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 845 880 - -
Aed5g2291 1081 MobiDBLite consensus disorder prediction 714 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2291 Aed-Chr5 24658992 24666086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2291 4 784 MAP Kinase Kinase Kinase AT1G63700 60.723 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aed5g2291 Pkinase 2.4e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2291 K20717 - gmx:100814422 1674.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g2291 5 24658992 24666086 Aed10g0658 10 5341691 5347808 PCT