Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2287 ATGAATGGAAGACGTCCCATCAAGCAAAAGAGCTCACTCTACGACAACCTCATGAAGATGGAAGATTCCTTAAAACGGCATCGTTTGACTTTTGTGTTTTTCCAATTAAATTTGACTGAAAGATCACAGATAGTAGCTTTCATCTTTATTATGGCGAGAAGATCTCCTCCGCGGGTTAACCAAACGTACGACACAGGCTGTACATCGCGAATGTTTAGAATCTTCAATTTTCGTGAAGTTCATTCTGACAGAGTATTGGTTTCCAATCGGAGGCATTTGAATGTTCGTGCTAATGGAAATGGAAACTCTAGAAATAGCTCAGATGTGCCTAGCACAGGTGATGAGAAGTACCTTCAAACTGGTGTGAGTTCCAGAAGAAGAAGAGATTATAGTTGTAAAAGTATTAGCAGCGTGGAGAATCAACAGGTAGCAGATTGGAGAGATGAAGTAACAAAGATGATTGTTGATCAGAGATTTGACAATAAAAATTATCTGGGCAAAGATGGGGCTGGCTGTGAGCCTAATCAATTCTTGGATGCTTTACAGATTTTATATTCAAACAAGGAGCTTTTCGTGAAACTTCTGCAAGATCCTAACTCTTTGTTAGTAAAACAGATTCATGACTTACAAAGTTCTCAAGTGAAAGAACCATATCAGCAGGCAAGGCAAAAAAGGATGAGTAGATTAAATAAGCCTCAAGATAGTAATGCTACACAATGTGTAAAACCTCTTAGGTCCTTTGATGGATCTTATTTGAGGTCAAGTTGTAAGCCTCAGTCCTCGAATAGAATAGTAGTTTTGAAGCCTAGCACTGTTAATGTGGAAACAAGCTTTGTTAGCCCTCCTCGTTCACCTGATAGCTTCAGTTCTGATGCACAAAATATTAGGCCTTCATATTTTCCCTTTAGCTGTATCAAGAGAAAATTGAAGCATGTCATGAAAGTAAGGAGACAAGAACATCAGTGGAGGACAAATGATGAAATGTCATGTAAATTTTCCTGCAGTTCCCAGGACTTGGAAGATGGTAAAAAAGCAAAACAACTGGAAATTGCTGAAAGAAATTCACCAACTAATGGCCATCCTAACACTGGAAAAAGGTTGAATTCATATCTTGATATGAAGAAGAGGGATAATATTATCAAGCTGAAGGATTCTGAGTTATGTATGAGGCTTGAAGCTGCTTCATTTGGTGAAAGTTTCAGTAACAACACATACAATACTTCAGTTGGCCCTTGTGAGGAGAATACATTGAACATAGTACATGTTGAAGGTAGGAAAGGTCCATCTCAGATGTTAAACTGTGGAATTGAGGAATGTGAACAGTGCACAAACTCTCTAGGGAGATCAATTCCTCTTCCTGGCTCTTTGTACTTGCCAAGCATGCATAGGTACTGCGAGCACAGTTCCATCACTGAAAGAATGAGAGATTACAGCAACAACTATCAAATGGTCCCCAGAACCATGTTGGGGCTTCCAAAAAAGGGGGGAAATGGTTCCTATAATTTTTTGGAACCGAAAATCAAGGATTCACCATTGGCCATTGTTAATATACATGCTGATAAGTTGCAACTTTTTGGTGAAGATATTAGTATCAGAAATAGTGTTCCTAGCGACAATCTATTTGCACATTATGATATTCCTAGAGATGGCAGATACACGGACAGCCCCACTCAGAATATTGACATGGATGATGACATAACAGGAGAAAGTGAATCGTTTCTGGAGTTGCATCCAGAGATCCAGAGTTTTCCTTTTTCACAAGATGATATTTCATTAAGCCTTTCATCCAGTCAGAGAACAGATGATTCAGTAAACATGGGAAACAAAGTTGAACACACCAGTGTTGAATCTGTTGTTGATCAATTTATTAAGGATGATGTTACCAACCCACCAATCACCACCTTTCAACCAGATGAGTCACTAATACAAGTAATGCACAACAAATTTGAAGAGAACCATTTTGAAGACCTTATAAGACTCTCTTTGGATCCAATGAACAGTTTAACCTCCACCAAGGACATCTCAGACTGTGTAAGGGAAATTCTGCATGCTCTCAAATGGGATGAACTTACTCTGAAGAGATCATGTGACCAATTGCTGGATCCATCCACCTTTGCTGAACTGAAGGAACTAACAAGCCAACTTTCTGGTGGTAGAATCTTGCATGACTGTGTCATCGAAATTTTCATGCAGGTATATCAGAACTGTGGTTTCCCACCTCATGTTTCTAACATAAATCCAAACGTCCATGCATATGTTGTGAAGAAACTTCTGGTTAAAGAGATTATAGAACTAGTTAAGTTGCATTTTCACCCCCGTCCATTACCTTTAACGTTAGAACAGCTTGTTGAAAAGGACTTAGCAAGACGTGGTTCATGGCTAAATATCCAAGCTGATACAGAAGATATTGCAATAGCGGTGGAGAAAGATGTTCTTGAAAAACTGGTGTTGGAAATTGCATCTGAGATGGATGTCAAAAACCACGACACGTTGCAGTGA 2499 0.391 MNGRRPIKQKSSLYDNLMKMEDSLKRHRLTFVFFQLNLTERSQIVAFIFIMARRSPPRVNQTYDTGCTSRMFRIFNFREVHSDRVLVSNRRHLNVRANGNGNSRNSSDVPSTGDEKYLQTGVSSRRRRDYSCKSISSVENQQVADWRDEVTKMIVDQRFDNKNYLGKDGAGCEPNQFLDALQILYSNKELFVKLLQDPNSLLVKQIHDLQSSQVKEPYQQARQKRMSRLNKPQDSNATQCVKPLRSFDGSYLRSSCKPQSSNRIVVLKPSTVNVETSFVSPPRSPDSFSSDAQNIRPSYFPFSCIKRKLKHVMKVRRQEHQWRTNDEMSCKFSCSSQDLEDGKKAKQLEIAERNSPTNGHPNTGKRLNSYLDMKKRDNIIKLKDSELCMRLEAASFGESFSNNTYNTSVGPCEENTLNIVHVEGRKGPSQMLNCGIEECEQCTNSLGRSIPLPGSLYLPSMHRYCEHSSITERMRDYSNNYQMVPRTMLGLPKKGGNGSYNFLEPKIKDSPLAIVNIHADKLQLFGEDISIRNSVPSDNLFAHYDIPRDGRYTDSPTQNIDMDDDITGESESFLELHPEIQSFPFSQDDISLSLSSSQRTDDSVNMGNKVEHTSVESVVDQFIKDDVTNPPITTFQPDESLIQVMHNKFEENHFEDLIRLSLDPMNSLTSTKDISDCVREILHALKWDELTLKRSCDQLLDPSTFAELKELTSQLSGGRILHDCVIEIFMQVYQNCGFPPHVSNINPNVHAYVVKKLLVKEIIELVKLHFHPRPLPLTLEQLVEKDLARRGSWLNIQADTEDIAIAVEKDVLEKLVLEIASEMDVKNHDTLQ 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2287 832 MobiDBLite consensus disorder prediction 95 120 - -
Aed5g2287 832 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 148 823 - -
Aed5g2287 832 Pfam Protein of unknown function (DUF3741) 157 200 IPR022212 -
Aed5g2287 832 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 52 146 - -
Aed5g2287 832 MobiDBLite consensus disorder prediction 95 119 - -
Aed5g2287 832 PANTHER DUF3741 FAMILY PROTEIN 148 823 - -
Aed5g2287 832 PANTHER DUF3741 FAMILY PROTEIN 52 146 - -
Aed5g2287 832 Pfam Domain of unknown function (DUF4378) 678 818 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2287 Aed-Chr5 24632770 24637823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2287 584 821 TRM (TON1 Recruiting Motif) Superfamily AT2G45900 28.340 1.71e-16 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2287 - - gmx:121174910 1246.49