Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2285 ATGGTGCCAGAGAATTTGAAGAAACAACTTGCTTTGGCTCTGAGAAGCATCCATTGGAGCTATGCAATCTTCTGGACCGATTCAACTACCCAACCCGGGGTGTTGAGCTGGGGTGAAGGGTATTACAATGGAGACATAAAGACTAGGAAAACAAGTCAAGGAGGAGAACTCAATTCTGACCAAATAGGGTTGCAGAGGAGTGAACAGCTGCGAGAGCTATTCAAATCCCTCAAAATTGTAGAAGTCAGCCCTCAAACCAAAAGGCCTTCAGCAGCACTGTCCCCAGAAGATCTCACAGATGCCGAGTGGTATTACTTGGTTTGCATGTCCTTCATATTCAACATTGGCCAAGGGTTACCAGGAAGAACTCTAGCGAAGGGTCAACCCATTTGGCTGAACAATGCTCATTCTGCTGATTGTAAACTTTTTAGTCGTTCTCTTCTGGCAAAGACAGTTGTGTGTTTTCCATTTAGAGAAGGGGTTATTGAGCTAGGTACTACTGAACAGGTCTCAGAAGATTTGGGTGTCATTGAACGGATCAAAACTTCTTTCTTGAATAGTCTGCATGTCAATGTTGCTAATAAGTCAGGGGTTACATTGAAATCAAGTAACCATGAAGATCTTGATTATGTAGCATTTGATCATAATACTTATAATGTTGAATCAATTCCAGAAGTTGGGTATAGCATAGCCAACACCACCTCTCCTGATGGTAGTTCAAATGAATTACAAGCCAATCAACCACTAGATGAAGCATTCATGGTTGAATGTGTAACCAATGGCACTTCTCAAGTCCAAAGCTGGCAAGTTATTGATGACGAACTGAGTAACTGTGTCCATAACTCCATGAATACCAGCGACTGTATATCACAAACTTTTGCCAGCCCTGAGAATATTGCTATTGCTTCTGCCCCCAAGTGTAATAACGCTTCTGACCCTTGTGGCAACAACCCAAAAATGACCTTAGTGGATCCTCGAAGTGATGATTGCCATTATCAGAGAGTTCTTTCTACCCTTATAAAAAGCTCTGGCCAGTTACTTATGGGAATGCATTTGCAAAAATTTCCTCAGGAATCAAGCTTTGTTGGTTGGAGGAAAGGACAGCCAATGGATTGCCAATGGCCTAGAGCAGGAACCTCACAAAAGTTATTGAAGAAAGTATTGTTTGAAGTTCCTCAAATGCACTTGGATGGGCTGCATGAGTCTCAAGAAGAGAATGATTATAAAGAGGGAATGAGAATAGAGGCTGATGAAAACGGCATGAACCATGTTATAAAGGAGGAGAAGAGCAAAACTAAACGAAAGGATGACAAAGTTTCAATACTAGATGATGCAATTGAATACCTTAAAAAGCTTGAGAGAAGGATTAAAGAGTTGGAAGCTCACACGGGGGTAACAGATGTAGAGACTGGGACTAGAAGATCACCTCAAGATACGATGGAGAGGATTTCTGATCATTGTTTTAGCAAAAATAATAATGGCAAGAAACCAGGGGTGAAAAAGAGGAAGTCTTGTGGTGTAGATGAGACAGGAAGAGAGATTAATTCAGATGCTTTAAAAGACAGTTATGCTAATGATGTTACTGTGAGTACTAGTGGCAATGAAATTGTGATCGAAATGAAGTGCCCCTCAAGAGAAGGAAGGATGCTGGAAATTATGGAAGCAGTTAATAGTTTCAATATAGATTTTAATTCAGTTCGGTCAACAGAAGCTGATGGAAATCTTCATCTGACCATTAAATCTGTGTTCACAGGACCAAGTGTTGCAACAGCCAAAAGAATCAAACAAGCACTCCAAAAAGTGGCTTCGAAGTGCTGA 1818 0.4098 MVPENLKKQLALALRSIHWSYAIFWTDSTTQPGVLSWGEGYYNGDIKTRKTSQGGELNSDQIGLQRSEQLRELFKSLKIVEVSPQTKRPSAALSPEDLTDAEWYYLVCMSFIFNIGQGLPGRTLAKGQPIWLNNAHSADCKLFSRSLLAKTVVCFPFREGVIELGTTEQVSEDLGVIERIKTSFLNSLHVNVANKSGVTLKSSNHEDLDYVAFDHNTYNVESIPEVGYSIANTTSPDGSSNELQANQPLDEAFMVECVTNGTSQVQSWQVIDDELSNCVHNSMNTSDCISQTFASPENIAIASAPKCNNASDPCGNNPKMTLVDPRSDDCHYQRVLSTLIKSSGQLLMGMHLQKFPQESSFVGWRKGQPMDCQWPRAGTSQKLLKKVLFEVPQMHLDGLHESQEENDYKEGMRIEADENGMNHVIKEEKSKTKRKDDKVSILDDAIEYLKKLERRIKELEAHTGVTDVETGTRRSPQDTMERISDHCFSKNNNGKKPGVKKRKSCGVDETGREINSDALKDSYANDVTVSTSGNEIVIEMKCPSREGRMLEIMEAVNSFNIDFNSVRSTEADGNLHLTIKSVFTGPSVATAKRIKQALQKVASKC 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2285 605 Coils Coil 442 462 - -
Aed5g2285 605 PANTHER TRANSCRIPTION FACTOR EGL1 3 601 - -
Aed5g2285 605 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 184 IPR025610 -
Aed5g2285 605 Gene3D - 381 469 IPR036638 GO:0046983
Aed5g2285 605 PANTHER TRANSCRIPTION FACTOR TT8 3 601 - -
Aed5g2285 605 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 433 465 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2285 Aed-Chr5 24620943 24625605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2285 2 605 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 43.425 1.05e-160 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2285 - - gmx:100808167 1042.72