Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed5g2282 ATGTCTGGATGCAGTAAATCACCCAAAAATGATCAGCAATCAATCAAATATTGGTGGATTCAACACGGAGGAGCATCCTCTGAGGCTGATCTTTCTTGTGTAGATTTTTCGCCCTCTCTTTCCAACAATGAGAACAAGCAATGCTATGGAAGTTCTCAACCAAAGTCCCCTCAGATACTACTGAGCACAGCTCAGCTCATCTCTGCAATAGGCCAGATATGGGATTCTGCCAGTTGCCCGCTTTCGGTTTTACTCCCAAAGGAAAATGTGAATCAGGATGATAAAGGATTCCCAAATGAGAAAATTCTGGATAGCATTCATGTGAAGAACAATGACTCGGGAAATGCTTCAAATGACACTAACTACCATCCTGTTACCGAGGGTGGTGCAAAGATTGTGCAGGAAAAATTGGATTTCCCCAAGGTAATGCAGAAGATATCAATACTTGACTCTTCTAGCGAAAGTCAAGATTATACTCATTCTTTATTCCAGAGGTGTTTTCAGGCTAGTGATAAAAATACAAATAAAGATTGGAAAGAAATGTCATGTAAATCAGGAAATGTATATTGGTGGGTAGGTAGGACTGCTACTAGGATGCTAAATAGTCAAGTGAATGTTACCCGATCTGTGAACCTGGAAACTAATGCTCCAGTTGCTGGGGGTAACAGTAACATTTCAATAGATACAAGCACCCGTGCATTGGTTAATGAGAGTGATGTGTGTAGTCCTAATTCAATTACACATGAAACTCAATCATTTTCTAATGCTGCAATTCTGAACACAGGAATAGTTAGCCCTTTTTGTTCAGACTGTTTTCTCCAAGCTGTGCCTGATACTAAGGCAGACAATGGTGCTTGTCAGACCCTTTCTTCTAGTTTGTGTGCAGACTATCATATTAACTCTATAGATTCCTATAATAATGCTTCTGATTCGTGTCAACATGAGATTGATGATAATGAATCACTGGAAATCCAAAGAAGACCTTTCTTGGATATAACTGATGATGAACCTAAGGTTCAGACCTCTGCAACCTTTCTAAAGCCTTGTAATTCCCAAGCCAAGCAAGAACATGCCTTTTCTGGGGCGTTAGCCGGTATATGTGTAAGCCTTTGTCTGCATCCTGTTGACACAATTAAAACGGTCAATCAAGCATGCCGTGCTGAACACAGGTCCATCTTTTACATTGGGAAGTCAATTGTTTCTGATAGAGGTTTGCTTGGACTGTATCGTGGAATTACCACAAATGTTGCATGTTCAGCTCCAATTTCGGCAGTTTATACTTTCTCCTATGAATCAGTTAAAGCAGCTTTGCTTCCTTATCTTCCAAAGGAGTATTATCCTTTTGCCCATTGCATGGGAGGTGGTTGTGCAAGCGTTGCCACCTCTTTCATTTTTACTCCCAGTGAGCGAATAAAGCAGCAGATGCAAGTTGGTTCTCATTATCGCAACTGCTGGGATGTACTGGTTGGAATTATCAGAAATGGTGGTTTTCCCTCCCTATATGCAGGTTGGAGAGCTGTACTATGCCGGAATGTTCCACATTCAATTATCAAGTTTTACACATATGAAAGCTTGAAGCAAGTGATGCCATCTAGTATTCAACCCAACACGTTTCAGACTTTAGTGTGTGGAGGATTAGCTGGATCTACTGCTGCTTTATTCACAACTCCATTTGATGTGATCAAGACTAGATTACAGACACAGATTCCCGGGTCTGCAAATCAATATGACAGTGTGCTCCATGCCCTTTACAAAATTAGTAAGAGTGAAGGATTGAAGGGCCTGTACAGGGGGTTGATTCCGAGGTTGATTATGTACATGTCTCAAGGATCACTATTCTTTGCTTCATATGAATTTTTCAAGAGGGCATTTTCTCTGGAAGCTGAAGACAGCAAAAACTTAGAATTAACACGTCCATCATAG 1923 0.4077 MSGCSKSPKNDQQSIKYWWIQHGGASSEADLSCVDFSPSLSNNENKQCYGSSQPKSPQILLSTAQLISAIGQIWDSASCPLSVLLPKENVNQDDKGFPNEKILDSIHVKNNDSGNASNDTNYHPVTEGGAKIVQEKLDFPKVMQKISILDSSSESQDYTHSLFQRCFQASDKNTNKDWKEMSCKSGNVYWWVGRTATRMLNSQVNVTRSVNLETNAPVAGGNSNISIDTSTRALVNESDVCSPNSITHETQSFSNAAILNTGIVSPFCSDCFLQAVPDTKADNGACQTLSSSLCADYHINSIDSYNNASDSCQHEIDDNESLEIQRRPFLDITDDEPKVQTSATFLKPCNSQAKQEHAFSGALAGICVSLCLHPVDTIKTVNQACRAEHRSIFYIGKSIVSDRGLLGLYRGITTNVACSAPISAVYTFSYESVKAALLPYLPKEYYPFAHCMGGGCASVATSFIFTPSERIKQQMQVGSHYRNCWDVLVGIIRNGGFPSLYAGWRAVLCRNVPHSIIKFYTYESLKQVMPSSIQPNTFQTLVCGGLAGSTAALFTTPFDVIKTRLQTQIPGSANQYDSVLHALYKISKSEGLKGLYRGLIPRLIMYMSQGSLFFASYEFFKRAFSLEAEDSKNLELTRPS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed5g2282 640 ProSiteProfiles Solute carrier (Solcar) repeat profile. 445 528 IPR018108 -
Aed5g2282 640 Pfam Mitochondrial carrier protein 536 625 IPR018108 -
Aed5g2282 640 Pfam Mitochondrial carrier protein 445 529 IPR018108 -
Aed5g2282 640 Pfam Mitochondrial carrier protein 356 437 IPR018108 -
Aed5g2282 640 SUPERFAMILY Mitochondrial carrier 356 620 IPR023395 -
Aed5g2282 640 ProSiteProfiles Solute carrier (Solcar) repeat profile. 352 436 IPR018108 -
Aed5g2282 640 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 632 - -
Aed5g2282 640 ProSiteProfiles Solute carrier (Solcar) repeat profile. 535 623 IPR018108 -
Aed5g2282 640 Gene3D Mitochondrial carrier domain 339 444 IPR023395 -
Aed5g2282 640 Gene3D Mitochondrial carrier domain 445 638 IPR023395 -
Aed5g2282 640 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 632 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed5g2282 Aed-Chr5 24600625 24605089 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed5g2282 360 624 Chloroplast and Mitochondria Gene Families AT1G07030 32.491 3.14e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed5g2282 - - gmx:100812271 1086.63